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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GSLPCDICKDVVTAAGDLKDNATEEEILVYLEKTCDWLPKPNSASCKEIVDSYLPVILDI
IKGESRPGEVCSALNLCES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2dob-a2-m2-cA 79 79 1.0000 1.0000 1.0000 2.82e-52 2dob-a2-m1-cA_2dob-a2-m2-cA
2 2dob-a2-m1-cA 79 79 1.0000 1.0000 1.0000 2.82e-52 2dob-a2-m1-cA_2dob-a2-m2-cA
3 7p4t-a1-m1-cD 80 80 0.7848 0.7750 0.7750 1.50e-35 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
4 7p4t-a1-m1-cC 80 80 0.7848 0.7750 0.7750 1.50e-35 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
5 7p4t-a1-m1-cB 80 80 0.7848 0.7750 0.7750 1.50e-35 7p4t-a1-m1-cB_7p4t-a1-m1-cC
6 7p4t-a1-m1-cA 80 80 0.7848 0.7750 0.7750 1.50e-35 7p4t-a1-m1-cA_7p4t-a1-m1-cD
7 5nxb-a1-m1-cD 80 80 0.7848 0.7750 0.7750 1.50e-35 5nxb-a1-m1-cC_5nxb-a1-m1-cD
8 5nxb-a1-m1-cC 80 80 0.7848 0.7750 0.7750 1.50e-35 5nxb-a1-m1-cC_5nxb-a1-m1-cD
9 5u85-a1-m1-cA 78 76 0.3924 0.3974 0.4079 1.15e-13 5u85-a1-m1-cB_5u85-a1-m1-cA
10 5u85-a1-m1-cB 77 74 0.3797 0.3896 0.4054 2.55e-13 5u85-a1-m1-cB_5u85-a1-m1-cA
11 2qyp-a1-m1-cA 78 74 0.4177 0.4231 0.4459 2.15e-12 2qyp-a1-m1-cA_2qyp-a1-m1-cB
12 2qyp-a1-m1-cB 81 74 0.4177 0.4074 0.4459 2.49e-12 2qyp-a1-m1-cA_2qyp-a1-m1-cB
13 2rb3-a2-m1-cC 79 76 0.3544 0.3544 0.3684 3.87e-11 2rb3-a2-m1-cB_2rb3-a2-m1-cC
14 2rb3-a2-m1-cB 79 76 0.3544 0.3544 0.3684 3.87e-11 2rb3-a2-m1-cB_2rb3-a2-m1-cC
15 6vyn-a3-m1-cD 78 75 0.3165 0.3205 0.3333 1.59e-10 6vyn-a3-m1-cD_6vyn-a3-m1-cF
16 6vyn-a3-m1-cF 79 75 0.3165 0.3165 0.3333 1.72e-10 6vyn-a3-m1-cD_6vyn-a3-m1-cF
17 7mbk-a1-m1-cA 77 75 0.3038 0.3117 0.3200 3.07e-08 7mbk-a1-m1-cA_7mbk-a1-m1-cB
18 7mbk-a1-m1-cB 82 75 0.3038 0.2927 0.3200 3.43e-08 7mbk-a1-m1-cA_7mbk-a1-m1-cB
19 6vze-a1-m1-cC 74 77 0.2405 0.2568 0.2468 7.57e-04 6vze-a1-m1-cB_6vze-a1-m1-cC
20 6vz0-a1-m1-cA 74 77 0.2405 0.2568 0.2468 7.57e-04 6vz0-a1-m1-cA_6vz0-a1-m1-cB
21 6vz0-a1-m1-cB 76 77 0.2405 0.2500 0.2468 8.02e-04 6vz0-a1-m1-cA_6vz0-a1-m1-cB
22 6vze-a1-m1-cB 73 76 0.2405 0.2603 0.2500 0.001 6vze-a1-m1-cB_6vze-a1-m1-cC, 6vze-a1-m1-cD_6vze-a1-m1-cB
23 6vze-a1-m1-cD 72 76 0.2405 0.2639 0.2500 0.001 6vze-a1-m1-cD_6vze-a1-m1-cB
24 3rfi-a2-m2-cA 80 35 0.1899 0.1875 0.4286 0.014 3rfi-a2-m1-cA_3rfi-a2-m2-cA
25 3rfi-a2-m1-cA 80 35 0.1899 0.1875 0.4286 0.014 3rfi-a2-m1-cA_3rfi-a2-m2-cA
26 6xb9-a2-m1-cB 193 60 0.2405 0.0984 0.3167 0.26 6xb9-a2-m1-cB_6xb9-a2-m1-cG
27 6xb9-a2-m1-cG 194 60 0.2405 0.0979 0.3167 0.26 6xb9-a2-m1-cB_6xb9-a2-m1-cG
28 3s64-a1-m2-cA 81 76 0.2405 0.2346 0.2500 0.45 3s64-a1-m1-cA_3s64-a1-m2-cA
29 3s64-a1-m1-cA 81 76 0.2405 0.2346 0.2500 0.45 3s64-a1-m1-cA_3s64-a1-m2-cA
30 2h09-a1-m2-cA 127 43 0.1392 0.0866 0.2558 1.3 2h09-a1-m1-cA_2h09-a1-m2-cA
31 2h09-a1-m1-cA 127 43 0.1392 0.0866 0.2558 1.3 2h09-a1-m1-cA_2h09-a1-m2-cA
32 5i85-a2-m4-cA 528 76 0.2658 0.0398 0.2763 3.5 5i85-a2-m1-cA_5i85-a2-m4-cA, 5i85-a2-m2-cA_5i85-a2-m4-cA
33 5i85-a2-m2-cA 528 76 0.2658 0.0398 0.2763 3.5 5i85-a2-m2-cA_5i85-a2-m4-cA
34 5i85-a2-m1-cA 528 76 0.2658 0.0398 0.2763 3.5 5i85-a2-m1-cA_5i85-a2-m4-cA
35 5i81-a2-m2-cA 528 76 0.2658 0.0398 0.2763 3.5 5i81-a2-m1-cA_5i81-a2-m2-cA
36 5i81-a2-m1-cA 528 76 0.2658 0.0398 0.2763 3.5 5i81-a2-m1-cA_5i81-a2-m2-cA
37 4zb6-a2-m1-cD 220 26 0.1392 0.0500 0.4231 5.2 4zb6-a2-m1-cC_4zb6-a2-m1-cD
38 4zb6-a2-m1-cC 217 26 0.1392 0.0507 0.4231 5.4 4zb6-a2-m1-cC_4zb6-a2-m1-cD
39 1g60-a1-m1-cA 238 38 0.1519 0.0504 0.3158 6.4 1g60-a1-m1-cB_1g60-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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