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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
GSMLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFEEKTEWHSVVVFNPHFAKIALQYL
HKGSKVYIEGKLQTRKWQDYTTEIVLPQYKGELHLLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lgj-a1-m1-cB 97 97 1.0000 1.0000 1.0000 5.62e-70 3lgj-a1-m1-cA_3lgj-a1-m1-cB
2 3lgj-a1-m1-cA 95 97 0.9691 0.9895 0.9691 1.19e-63 3lgj-a1-m1-cA_3lgj-a1-m1-cB
3 3pgz-a1-m1-cA 109 106 0.6289 0.5596 0.5755 2.67e-39 3pgz-a1-m1-cA_3pgz-a1-m1-cB
4 3pgz-a1-m1-cB 114 111 0.6289 0.5351 0.5495 1.12e-38 3pgz-a1-m1-cA_3pgz-a1-m1-cB
5 1sru-a1-m1-cA 100 88 0.4948 0.4800 0.5455 1.53e-26 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
6 1sru-a1-m1-cD 101 89 0.4948 0.4752 0.5393 2.16e-26 1sru-a1-m1-cA_1sru-a1-m1-cD
7 7f25-a1-m1-cB 106 105 0.5361 0.4906 0.4952 2.95e-26 7f25-a1-m1-cA_7f25-a1-m1-cB
8 7f25-a1-m1-cA 106 105 0.5361 0.4906 0.4952 2.95e-26 7f25-a1-m1-cA_7f25-a1-m1-cB
9 3tqy-a1-m1-cD 96 93 0.4845 0.4896 0.5054 6.34e-25 3tqy-a1-m1-cD_3tqy-a1-m1-cC
10 4mz9-a1-m1-cD 114 100 0.4948 0.4211 0.4800 9.95e-25 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
11 4mz9-a1-m1-cC 114 100 0.4948 0.4211 0.4800 9.95e-25 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
12 4mz9-a1-m1-cB 114 100 0.4948 0.4211 0.4800 9.95e-25 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
13 5odn-a1-m1-cH 99 87 0.4639 0.4545 0.5172 1.27e-24 5odn-a1-m1-cA_5odn-a1-m1-cH
14 5odn-a1-m1-cA 99 87 0.4639 0.4545 0.5172 1.27e-24 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
15 3tqy-a1-m1-cC 106 103 0.4845 0.4434 0.4563 5.01e-24 3tqy-a1-m1-cD_3tqy-a1-m1-cC
16 1kaw-a1-m1-cD 96 90 0.4845 0.4896 0.5222 1.88e-23 1kaw-a1-m1-cC_1kaw-a1-m1-cD
17 1kaw-a1-m1-cC 96 90 0.4845 0.4896 0.5222 1.88e-23 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
18 1kaw-a1-m1-cA 96 90 0.4845 0.4896 0.5222 1.88e-23 1kaw-a1-m1-cA_1kaw-a1-m1-cC
19 5odn-a1-m1-cD 106 88 0.4639 0.4245 0.5114 3.98e-23 5odn-a1-m1-cA_5odn-a1-m1-cD
20 5odn-a1-m1-cC 102 89 0.4639 0.4412 0.5056 4.55e-23 5odn-a1-m1-cC_5odn-a1-m1-cF
21 5odn-a1-m1-cG 102 91 0.4536 0.4314 0.4835 9.24e-23 5odn-a1-m1-cG_5odn-a1-m1-cE
22 1sru-a1-m1-cC 96 89 0.4742 0.4792 0.5169 2.05e-22 1sru-a1-m1-cC_1sru-a1-m1-cA
23 5odn-a1-m1-cF 105 93 0.4639 0.4286 0.4839 2.25e-22 5odn-a1-m1-cC_5odn-a1-m1-cF
24 5odn-a1-m1-cE 105 93 0.4639 0.4286 0.4839 2.25e-22 5odn-a1-m1-cG_5odn-a1-m1-cE
25 3ulp-a1-m1-cD 113 108 0.4433 0.3805 0.3981 6.17e-22 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
26 3ulp-a1-m1-cA 114 109 0.4433 0.3772 0.3945 1.25e-21 3ulp-a1-m1-cD_3ulp-a1-m1-cA
27 3ulp-a1-m1-cB 114 109 0.4433 0.3772 0.3945 1.39e-21 3ulp-a1-m1-cD_3ulp-a1-m1-cB
28 3ulp-a1-m1-cC 116 111 0.4433 0.3707 0.3874 2.26e-21 3ulp-a1-m1-cD_3ulp-a1-m1-cC
29 5odp-a1-m1-cA 99 82 0.4021 0.3939 0.4756 1.77e-17 5odp-a1-m1-cA_5odp-a1-m1-cG
30 5odp-a1-m1-cG 100 81 0.3918 0.3800 0.4691 1.59e-16 5odp-a1-m1-cA_5odp-a1-m1-cG
31 2dud-a2-m2-cB 92 77 0.3196 0.3370 0.4026 1.70e-13 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
32 2dud-a2-m2-cA 95 80 0.3196 0.3263 0.3875 6.93e-13 2dud-a2-m2-cB_2dud-a2-m2-cA
33 2dud-a2-m1-cA 95 80 0.3196 0.3263 0.3875 6.93e-13 2dud-a2-m2-cB_2dud-a2-m1-cA
34 5xgt-a1-m1-cA 104 98 0.3505 0.3269 0.3469 7.53e-12 5xgt-a1-m1-cA_5xgt-a1-m1-cB
35 5xgt-a1-m1-cB 105 98 0.3505 0.3238 0.3469 7.71e-12 5xgt-a1-m1-cA_5xgt-a1-m1-cB
36 6bhw-a2-m1-cE 99 80 0.2990 0.2929 0.3625 1.46e-11 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
37 7d8j-a1-m2-cB 98 91 0.3608 0.3571 0.3846 2.68e-11 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
38 7d8j-a1-m2-cA 112 97 0.3608 0.3125 0.3608 2.92e-11 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
39 7d8j-a1-m1-cA 112 97 0.3608 0.3125 0.3608 2.92e-11 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
40 6bhw-a2-m1-cG 101 82 0.2887 0.2772 0.3415 8.67e-10 6bhw-a2-m1-cE_6bhw-a2-m1-cG
41 6bhx-a1-m1-cC 102 80 0.2990 0.2843 0.3625 1.22e-09 6bhx-a1-m1-cA_6bhx-a1-m1-cC
42 6bhw-a2-m1-cF 96 80 0.2990 0.3021 0.3625 1.67e-09 6bhw-a2-m1-cF_6bhw-a2-m1-cE
43 6bhx-a1-m1-cA 98 87 0.3196 0.3163 0.3563 4.13e-09 6bhx-a1-m1-cA_6bhx-a1-m1-cC
44 2vw9-a1-m2-cB 105 88 0.3196 0.2952 0.3523 1.83e-08 2vw9-a1-m1-cB_2vw9-a1-m2-cB
45 2vw9-a1-m1-cB 105 88 0.3196 0.2952 0.3523 1.83e-08 2vw9-a1-m1-cB_2vw9-a1-m2-cB
46 3vdy-a1-m1-cA 101 93 0.2990 0.2871 0.3118 4.88e-08 3vdy-a1-m2-cB_3vdy-a1-m1-cA
47 3vdy-a1-m2-cB 97 91 0.2990 0.2990 0.3187 1.06e-07 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
48 3vdy-a1-m1-cB 97 91 0.2990 0.2990 0.3187 1.06e-07 3vdy-a1-m1-cB_3vdy-a1-m2-cB
49 1z9f-a2-m4-cA 89 76 0.2887 0.3146 0.3684 2.10e-07 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
50 1z9f-a2-m3-cA 89 76 0.2887 0.3146 0.3684 2.10e-07 1z9f-a2-m3-cA_1z9f-a2-m4-cA
51 1z9f-a2-m1-cA 89 76 0.2887 0.3146 0.3684 2.10e-07 1z9f-a2-m1-cA_1z9f-a2-m4-cA
52 3eiv-a2-m1-cB 111 76 0.2371 0.2072 0.3026 1.83e-06 3eiv-a2-m1-cA_3eiv-a2-m1-cB
53 3eiv-a3-m1-cC 111 90 0.2784 0.2432 0.3000 1.09e-05 3eiv-a3-m1-cD_3eiv-a3-m1-cC
54 3eiv-a2-m1-cA 98 78 0.2165 0.2143 0.2692 2.13e-05 3eiv-a2-m1-cA_3eiv-a2-m1-cB
55 3eiv-a1-m1-cA 98 78 0.2165 0.2143 0.2692 2.13e-05 3eiv-a1-m1-cA_3eiv-a1-m1-cD
56 3eiv-a3-m1-cD 100 71 0.2268 0.2200 0.3099 3.96e-05 3eiv-a3-m1-cD_3eiv-a3-m1-cC
57 3eiv-a1-m1-cD 100 71 0.2268 0.2200 0.3099 3.96e-05 3eiv-a1-m1-cA_3eiv-a1-m1-cD
58 6cqk-a1-m1-cB 93 82 0.1856 0.1935 0.2195 8.35e-05 6cqk-a1-m1-cD_6cqk-a1-m1-cB
59 3a5u-a1-m2-cB 112 79 0.2268 0.1964 0.2785 1.05e-04 3a5u-a1-m2-cB_3a5u-a1-m2-cA
60 1ue7-a2-m3-cD 95 70 0.1959 0.2000 0.2714 1.32e-04 1ue7-a2-m1-cD_1ue7-a2-m3-cD
61 1ue7-a2-m1-cD 95 70 0.1959 0.2000 0.2714 1.32e-04 1ue7-a2-m1-cD_1ue7-a2-m3-cD
62 7f5y-a1-m2-cA 109 74 0.2165 0.1927 0.2838 2.37e-04 7f5y-a1-m2-cA_7f5y-a1-m2-cB
63 2ihf-a1-m2-cA 205 84 0.2371 0.1122 0.2738 2.47e-04 2ihf-a1-m1-cA_2ihf-a1-m2-cA
64 2ihf-a1-m2-cA 205 78 0.2577 0.1220 0.3205 4.05e-04 2ihf-a1-m1-cA_2ihf-a1-m2-cA
65 2ihf-a1-m1-cA 205 84 0.2371 0.1122 0.2738 2.47e-04 2ihf-a1-m1-cA_2ihf-a1-m2-cA
66 2ihf-a1-m1-cA 205 78 0.2577 0.1220 0.3205 4.05e-04 2ihf-a1-m1-cA_2ihf-a1-m2-cA
67 1ue7-a1-m2-cB 98 73 0.2165 0.2143 0.2877 8.18e-04 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
68 1x3e-a1-m2-cA 110 79 0.2268 0.2000 0.2785 8.89e-04 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
69 1x3e-a1-m1-cA 110 79 0.2268 0.2000 0.2785 8.89e-04 1x3e-a1-m1-cA_1x3e-a1-m2-cA
70 2fxq-a1-m2-cA 197 80 0.2474 0.1218 0.3000 0.002 2fxq-a1-m1-cA_2fxq-a1-m2-cA
71 2fxq-a1-m2-cA 197 93 0.2474 0.1218 0.2581 0.005 2fxq-a1-m1-cA_2fxq-a1-m2-cA
72 2fxq-a1-m1-cA 197 80 0.2474 0.1218 0.3000 0.002 2fxq-a1-m1-cA_2fxq-a1-m2-cA
73 2fxq-a1-m1-cA 197 93 0.2474 0.1218 0.2581 0.005 2fxq-a1-m1-cA_2fxq-a1-m2-cA
74 3udg-a2-m1-cB 214 79 0.2577 0.1168 0.3165 0.002 3udg-a2-m1-cB_3udg-a2-m1-cC
75 3udg-a2-m1-cB 214 80 0.2062 0.0935 0.2500 0.66 3udg-a2-m1-cB_3udg-a2-m1-cC
76 7f5z-a1-m2-cA 117 82 0.2165 0.1795 0.2561 0.002 7f5z-a1-m2-cA_7f5z-a1-m2-cB
77 1x3e-a1-m2-cB 119 84 0.2371 0.1933 0.2738 0.002 1x3e-a1-m2-cA_1x3e-a1-m2-cB
78 1ue1-a1-m2-cB 119 84 0.2268 0.1849 0.2619 0.004 1ue1-a1-m1-cB_1ue1-a1-m2-cB
79 1ue1-a1-m1-cB 119 84 0.2268 0.1849 0.2619 0.004 1ue1-a1-m1-cB_1ue1-a1-m2-cB
80 7f5y-a1-m2-cB 120 84 0.2268 0.1833 0.2619 0.004 7f5y-a1-m2-cA_7f5y-a1-m2-cB
81 3a5u-a1-m2-cA 118 83 0.2371 0.1949 0.2771 0.004 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
82 3a5u-a1-m1-cA 118 83 0.2371 0.1949 0.2771 0.004 3a5u-a1-m1-cA_3a5u-a1-m2-cA
83 3udg-a2-m1-cC 214 81 0.2577 0.1168 0.3086 0.005 3udg-a2-m1-cB_3udg-a2-m1-cC
84 3udg-a2-m1-cC 214 77 0.1959 0.0888 0.2468 6.5 3udg-a2-m1-cB_3udg-a2-m1-cC
85 1ue7-a1-m2-cA 106 74 0.2062 0.1887 0.2703 0.006 1ue7-a1-m2-cB_1ue7-a1-m2-cA
86 1ue7-a1-m1-cA 106 74 0.2062 0.1887 0.2703 0.006 1ue7-a1-m2-cB_1ue7-a1-m1-cA
87 7f5z-a1-m2-cB 118 82 0.2165 0.1780 0.2561 0.007 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
88 7f5z-a1-m1-cB 118 82 0.2165 0.1780 0.2561 0.007 7f5z-a1-m1-cB_7f5z-a1-m2-cB
89 6cqk-a1-m1-cD 87 67 0.1649 0.1839 0.2388 0.013 6cqk-a1-m1-cD_6cqk-a1-m1-cB
90 1se8-a1-m2-cA 205 78 0.2474 0.1171 0.3077 0.038 1se8-a1-m1-cA_1se8-a1-m2-cA
91 1se8-a1-m2-cA 205 90 0.2165 0.1024 0.2333 6.0 1se8-a1-m1-cA_1se8-a1-m2-cA
92 1se8-a1-m1-cA 205 78 0.2474 0.1171 0.3077 0.038 1se8-a1-m1-cA_1se8-a1-m2-cA
93 1se8-a1-m1-cA 205 90 0.2165 0.1024 0.2333 6.0 1se8-a1-m1-cA_1se8-a1-m2-cA
94 6cqo-a1-m1-cA 93 32 0.1134 0.1183 0.3438 0.16 6cqo-a1-m1-cG_6cqo-a1-m1-cA
95 6cqo-a1-m1-cG 87 32 0.1134 0.1264 0.3438 0.16 6cqo-a1-m1-cG_6cqo-a1-m1-cA
96 2bol-a1-m1-cA 301 50 0.1546 0.0498 0.3000 1.7 2bol-a1-m1-cB_2bol-a1-m1-cA
97 4rl4-a1-m1-cA 173 31 0.1237 0.0694 0.3871 2.6 4rl4-a1-m1-cA_4rl4-a1-m1-cB
98 2bol-a1-m1-cB 290 50 0.1649 0.0552 0.3200 3.8 2bol-a1-m1-cB_2bol-a1-m1-cA
99 3k7u-a1-m2-cC 98 70 0.1856 0.1837 0.2571 8.8 3k7u-a1-m1-cC_3k7u-a1-m2-cC
100 3k7u-a1-m1-cC 98 70 0.1856 0.1837 0.2571 8.8 3k7u-a1-m1-cC_3k7u-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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