HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
GSMLVLITYDVQTSSMGGTKRLRKVAKACQNYGQRVQNSVFECIVDSTQLTSLKLELTSL
IDEEKDSLRIYRLGNNYKTKVEHIGAKPSIDLEDPLIF

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	8d3q-a1-m1-cF	98	98	1.0000	1.0000	1.0000	2.81e-69	8d3q-a1-m1-cE_8d3q-a1-m1-cF
2	8d3q-a1-m1-cE	98	98	1.0000	1.0000	1.0000	2.81e-69	8d3q-a1-m1-cE_8d3q-a1-m1-cF
3	4es1-a1-m2-cA	95	96	0.9286	0.9579	0.9479	1.81e-61	4es1-a1-m1-cA_4es1-a1-m2-cA
4	4es1-a1-m1-cA	95	96	0.9286	0.9579	0.9479	1.81e-61	4es1-a1-m1-cA_4es1-a1-m2-cA
5	3oq2-a3-m3-cA	99	97	0.6020	0.5960	0.6082	3.50e-41	3oq2-a3-m3-cA_3oq2-a3-m4-cB
6	3oq2-a3-m1-cA	99	97	0.6020	0.5960	0.6082	3.50e-41	3oq2-a3-m1-cA_3oq2-a3-m4-cB
7	3oq2-a2-m2-cA	99	97	0.6020	0.5960	0.6082	3.50e-41	3oq2-a2-m2-cA_3oq2-a2-m2-cB
8	3oq2-a3-m4-cB	102	97	0.6020	0.5784	0.6082	3.54e-41	3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
9	3oq2-a2-m2-cB	102	97	0.6020	0.5784	0.6082	3.54e-41	3oq2-a2-m2-cA_3oq2-a2-m2-cB
10	5h1o-a1-m1-cA	86	86	0.5408	0.6163	0.6163	1.11e-34	5h1o-a1-m1-cB_5h1o-a1-m1-cA
11	5h1o-a1-m1-cB	83	85	0.5102	0.6024	0.5882	2.45e-30	5h1o-a1-m1-cB_5h1o-a1-m1-cA
12	4qr2-a1-m1-cA	83	83	0.4694	0.5542	0.5542	3.08e-29	4qr2-a1-m1-cB_4qr2-a1-m1-cA
13	4qr2-a1-m1-cB	82	80	0.4592	0.5488	0.5625	1.93e-28	4qr2-a1-m1-cB_4qr2-a1-m1-cA
14	7f84-a1-m1-cB	89	83	0.3469	0.3820	0.4096	2.13e-19	7f84-a1-m1-cA_7f84-a1-m1-cB
15	7f84-a1-m1-cA	89	83	0.3469	0.3820	0.4096	2.13e-19	7f84-a1-m1-cA_7f84-a1-m1-cB
16	5g4d-a1-m2-cA	79	79	0.3061	0.3797	0.3797	1.45e-08	5g4d-a1-m1-cA_5g4d-a1-m2-cA
17	5g4d-a1-m1-cA	79	79	0.3061	0.3797	0.3797	1.45e-08	5g4d-a1-m1-cA_5g4d-a1-m2-cA
18	7cr8-a6-m1-cF	93	74	0.2755	0.2903	0.3649	2.07e-08	7cr8-a6-m1-cE_7cr8-a6-m1-cF
19	7cr8-a6-m1-cE	93	74	0.2755	0.2903	0.3649	2.07e-08	7cr8-a6-m1-cE_7cr8-a6-m1-cF
20	7ei1-a1-m1-cR	84	71	0.2755	0.3214	0.3803	1.08e-07	7ei1-a1-m1-cQ_7ei1-a1-m1-cR
21	7ei1-a1-m1-cQ	84	71	0.2755	0.3214	0.3803	1.08e-07	7ei1-a1-m1-cQ_7ei1-a1-m1-cR
22	1zpw-a2-m2-cX	82	88	0.3265	0.3902	0.3636	3.07e-05	1zpw-a2-m1-cX_1zpw-a2-m2-cX
23	1zpw-a2-m1-cX	82	88	0.3265	0.3902	0.3636	3.07e-05	1zpw-a2-m1-cX_1zpw-a2-m2-cX
24	6k2e-a1-m1-cB	87	82	0.2755	0.3103	0.3293	5.47e-05	6k2e-a1-m1-cB_6k2e-a1-m1-cA
25	6k2e-a1-m1-cA	88	81	0.2755	0.3068	0.3333	6.00e-05	6k2e-a1-m1-cB_6k2e-a1-m1-cA
26	7kfu-a1-m1-cB	96	97	0.2449	0.2500	0.2474	0.051	7kfu-a1-m1-cA_7kfu-a1-m1-cB
27	7kfu-a1-m1-cA	96	97	0.2449	0.2500	0.2474	0.051	7kfu-a1-m1-cA_7kfu-a1-m1-cB
28	7uaj-a1-m1-cC	509	73	0.2143	0.0413	0.2877	0.86	7uaj-a1-m1-cC_7uaj-a1-m1-cD
29	7uaj-a1-m1-cD	509	69	0.2143	0.0413	0.3043	1.4	7uaj-a1-m1-cC_7uaj-a1-m1-cD
30	6ck7-a2-m1-cD	172	62	0.1531	0.0872	0.2419	4.2	6ck7-a2-m1-cC_6ck7-a2-m1-cD
31	6ck7-a2-m1-cC	172	62	0.1531	0.0872	0.2419	4.2	6ck7-a2-m1-cC_6ck7-a2-m1-cD
32	1i7n-a2-m2-cB	308	57	0.1837	0.0584	0.3158	8.7	1i7n-a2-m2-cA_1i7n-a2-m2-cB
33	1i7n-a2-m2-cA	308	57	0.1837	0.0584	0.3158	8.7	1i7n-a2-m2-cA_1i7n-a2-m2-cB
34	1i7l-a2-m2-cB	309	57	0.1837	0.0583	0.3158	9.0	1i7l-a2-m1-cB_1i7l-a2-m2-cB
35	1i7l-a2-m1-cB	309	57	0.1837	0.0583	0.3158	9.0	1i7l-a2-m1-cB_1i7l-a2-m2-cB

[Back]

Reference:
Jacob Schwartz et al.