Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GSMQIFVKFRTGKTYTLEVEPSDTIENVKAKIQDKLGIPPDQQWLIFAGKRLEDGRTLSD
YNIQKESTLRGVRRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5tog-a2-m2-cA 75 75 1.0000 1.0000 1.0000 3.50e-51 5tog-a2-m1-cA_5tog-a2-m2-cA
2 5tog-a2-m1-cA 75 75 1.0000 1.0000 1.0000 3.50e-51 5tog-a2-m1-cA_5tog-a2-m2-cA
3 6dj9-a3-m1-cJ 77 75 0.8000 0.7792 0.8000 5.09e-34 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
4 6dj9-a3-m1-cI 78 75 0.8000 0.7692 0.8000 5.18e-34 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
5 6nxl-a3-m1-cC 73 67 0.7600 0.7808 0.8507 5.93e-34 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6nxl-a3-m1-cD 74 67 0.7600 0.7703 0.8507 6.44e-34 6nxl-a3-m1-cC_6nxl-a3-m1-cD
7 6ob1-a1-m1-cA 75 67 0.7600 0.7600 0.8507 7.72e-34 6ob1-a1-m1-cA_6ob1-a1-m1-cB
8 7rma-a1-m2-cA 75 69 0.7067 0.7067 0.7681 1.14e-32 7rma-a1-m1-cA_7rma-a1-m2-cA
9 7rma-a1-m1-cA 75 69 0.7067 0.7067 0.7681 1.14e-32 7rma-a1-m1-cA_7rma-a1-m2-cA
10 6ob1-a1-m1-cB 75 67 0.7467 0.7467 0.8358 1.38e-32 6ob1-a1-m1-cA_6ob1-a1-m1-cB
11 5o6s-a2-m1-cD 75 69 0.7067 0.7067 0.7681 7.50e-32 5o6s-a2-m1-cC_5o6s-a2-m1-cD
12 5o6t-a2-m1-cC 75 68 0.6933 0.6933 0.7647 4.95e-31 5o6t-a2-m1-cD_5o6t-a2-m1-cC
13 5o6s-a2-m1-cC 75 68 0.6933 0.6933 0.7647 4.95e-31 5o6s-a2-m1-cC_5o6s-a2-m1-cD
14 5o6t-a2-m1-cD 74 68 0.6933 0.7027 0.7647 5.15e-31 5o6t-a2-m1-cD_5o6t-a2-m1-cC
15 6njg-a1-m2-cC 76 73 0.7067 0.6974 0.7260 7.40e-31 6njg-a1-m1-cC_6njg-a1-m2-cC
16 6njg-a1-m1-cC 76 73 0.7067 0.6974 0.7260 7.40e-31 6njg-a1-m1-cC_6njg-a1-m2-cC
17 8cx9-a4-m1-cJ 74 67 0.7200 0.7297 0.8060 8.07e-31 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
18 8cx9-a4-m1-cH 74 67 0.7200 0.7297 0.8060 8.07e-31 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
19 1ndd-a5-m1-cD 73 73 0.4267 0.4384 0.4384 4.31e-16 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cC 73 73 0.4267 0.4384 0.4384 4.31e-16 1ndd-a5-m1-cC_1ndd-a5-m1-cD
21 1ndd-a5-m1-cA 74 73 0.4267 0.4324 0.4384 5.05e-16 1ndd-a5-m1-cD_1ndd-a5-m1-cA
22 1ndd-a5-m1-cB 76 73 0.4267 0.4211 0.4384 5.13e-16 1ndd-a5-m1-cD_1ndd-a5-m1-cB
23 2wyq-a1-m2-cA 77 69 0.2933 0.2857 0.3188 2.33e-04 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 69 0.2933 0.2857 0.3188 2.33e-04 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 3qa8-a2-m1-cF 622 54 0.2267 0.0273 0.3148 0.019 3qa8-a2-m1-cE_3qa8-a2-m1-cF
26 3qa8-a2-m1-cE 622 54 0.2267 0.0273 0.3148 0.019 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
27 3qa8-a2-m1-cH 541 54 0.2267 0.0314 0.3148 0.023 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 7m58-a1-m1-cC 143 45 0.1733 0.0909 0.2889 0.043 7m58-a1-m1-cB_7m58-a1-m1-cC
29 7m58-a1-m1-cB 143 45 0.1733 0.0909 0.2889 0.043 7m58-a1-m1-cB_7m58-a1-m1-cC
30 4e3c-a3-m1-cE 624 36 0.1733 0.0208 0.3611 0.21 4e3c-a3-m1-cD_4e3c-a3-m1-cE
31 4e3c-a3-m1-cD 624 36 0.1733 0.0208 0.3611 0.21 4e3c-a3-m1-cD_4e3c-a3-m1-cE
32 4kik-a1-m1-cA 618 36 0.1733 0.0210 0.3611 0.22 4kik-a1-m1-cA_4kik-a1-m1-cB
33 4kik-a1-m1-cB 648 36 0.1733 0.0201 0.3611 0.24 4kik-a1-m1-cA_4kik-a1-m1-cB
34 2anu-a1-m3-cB 217 40 0.1467 0.0507 0.2750 0.96 2anu-a1-m3-cB_2anu-a1-m2-cA, 2anu-a1-m3-cD_2anu-a1-m3-cB
35 2anu-a5-m3-cD 216 40 0.1467 0.0509 0.2750 0.98 2anu-a5-m3-cD_2anu-a5-m2-cC
36 2anu-a1-m3-cD 216 40 0.1467 0.0509 0.2750 0.98 2anu-a1-m3-cD_2anu-a1-m3-cB
37 6vzz-a1-m2-cA 374 64 0.2533 0.0508 0.2969 0.99 6vzz-a1-m1-cA_6vzz-a1-m2-cA
38 6vzz-a1-m1-cA 374 64 0.2533 0.0508 0.2969 0.99 6vzz-a1-m1-cA_6vzz-a1-m2-cA
39 6h56-a1-m1-cA 181 19 0.1333 0.0552 0.5263 2.0 6h56-a1-m1-cB_6h56-a1-m1-cA
40 6h56-a1-m1-cB 179 19 0.1333 0.0559 0.5263 2.0 6h56-a1-m1-cB_6h56-a1-m1-cA
41 1kdg-a2-m3-cA 541 27 0.1067 0.0148 0.2963 2.4 1kdg-a2-m2-cA_1kdg-a2-m3-cA, 1kdg-a2-m3-cA_1kdg-a2-m3-cB
42 1kdg-a2-m2-cA 541 27 0.1067 0.0148 0.2963 2.4 1kdg-a2-m2-cA_1kdg-a2-m3-cA
43 1kdg-a2-m3-cB 546 27 0.1067 0.0147 0.2963 2.4 1kdg-a2-m3-cA_1kdg-a2-m3-cB
44 8adl-a1-m1-cO 786 55 0.1867 0.0178 0.2545 2.7 8adl-a1-m1-cG_8adl-a1-m1-cO, 8adl-a1-m1-cO_8adl-a1-m1-cB
45 8adl-a1-m1-cG 786 55 0.1867 0.0178 0.2545 2.7 8adl-a1-m1-cG_8adl-a1-m1-cO
46 5lnl-a1-m1-cB 132 41 0.1733 0.0985 0.3171 3.5 5lnl-a1-m1-cB_5lnl-a1-m1-cC
47 5lnl-a1-m1-cC 133 41 0.1733 0.0977 0.3171 4.0 5lnl-a1-m1-cB_5lnl-a1-m1-cC
48 5dwa-a1-m1-cB 278 38 0.1600 0.0432 0.3158 5.0 5dwa-a1-m1-cA_5dwa-a1-m1-cB
49 5dwa-a1-m1-cA 278 38 0.1600 0.0432 0.3158 5.0 5dwa-a1-m1-cA_5dwa-a1-m1-cB
50 7cgz-a1-m1-cA 321 32 0.1333 0.0312 0.3125 8.5 7cgz-a1-m1-cA_7cgz-a1-m1-cB
51 7cdy-a1-m1-cA 346 32 0.1333 0.0289 0.3125 8.6 7cdy-a1-m1-cB_7cdy-a1-m1-cA
52 7cdy-a1-m1-cB 344 32 0.1333 0.0291 0.3125 8.8 7cdy-a1-m1-cB_7cdy-a1-m1-cA
53 7cgz-a1-m1-cB 342 32 0.1333 0.0292 0.3125 8.9 7cgz-a1-m1-cA_7cgz-a1-m1-cB
54 5f7c-a6-m1-cD 623 35 0.1733 0.0209 0.3714 9.1 5f7c-a6-m1-cB_5f7c-a6-m1-cD
55 7qyp-a1-m1-cB 519 60 0.2133 0.0308 0.2667 9.2 7qyp-a1-m1-cA_7qyp-a1-m1-cB
56 7qyp-a1-m1-cA 519 60 0.2133 0.0308 0.2667 9.2 7qyp-a1-m1-cA_7qyp-a1-m1-cB
57 5f7c-a6-m1-cB 611 35 0.1733 0.0213 0.3714 9.2 5f7c-a6-m1-cB_5f7c-a6-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600