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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GSMQILVTTISAETIRLEVEPSDTIENVKAKIQDKEGIPPDQQRLFFEGKQLEDGRTLSD
YNINKKSTLLLVVKF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5o6s-a2-m1-cD 75 75 1.0000 1.0000 1.0000 5.95e-50 5o6s-a2-m1-cC_5o6s-a2-m1-cD
2 5o6t-a2-m1-cC 75 74 0.9867 0.9867 1.0000 3.93e-49 5o6t-a2-m1-cD_5o6t-a2-m1-cC
3 5o6s-a2-m1-cC 75 74 0.9867 0.9867 1.0000 3.93e-49 5o6s-a2-m1-cC_5o6s-a2-m1-cD
4 5o6t-a2-m1-cD 74 74 0.9867 1.0000 1.0000 5.08e-49 5o6t-a2-m1-cD_5o6t-a2-m1-cC
5 6nxl-a3-m1-cD 74 71 0.7467 0.7568 0.7887 6.34e-36 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6nxl-a3-m1-cC 73 71 0.7467 0.7671 0.7887 6.65e-36 6nxl-a3-m1-cC_6nxl-a3-m1-cD
7 6ob1-a1-m1-cA 75 72 0.7467 0.7467 0.7778 7.19e-36 6ob1-a1-m1-cA_6ob1-a1-m1-cB
8 6ob1-a1-m1-cB 75 72 0.7467 0.7467 0.7778 2.90e-35 6ob1-a1-m1-cA_6ob1-a1-m1-cB
9 6njg-a1-m2-cC 76 70 0.7333 0.7237 0.7857 5.65e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
10 6njg-a1-m1-cC 76 70 0.7333 0.7237 0.7857 5.65e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
11 7rma-a1-m2-cA 75 72 0.7200 0.7200 0.7500 4.37e-33 7rma-a1-m1-cA_7rma-a1-m2-cA
12 7rma-a1-m1-cA 75 72 0.7200 0.7200 0.7500 4.37e-33 7rma-a1-m1-cA_7rma-a1-m2-cA
13 6dj9-a3-m1-cI 78 72 0.7333 0.7051 0.7639 3.35e-32 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
14 6dj9-a3-m1-cJ 77 71 0.7333 0.7143 0.7746 4.34e-32 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
15 8cx9-a4-m1-cJ 74 69 0.7200 0.7297 0.7826 7.38e-32 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
16 8cx9-a4-m1-cH 74 69 0.7200 0.7297 0.7826 7.38e-32 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
17 5tog-a2-m2-cA 75 69 0.7067 0.7067 0.7681 7.50e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 69 0.7067 0.7067 0.7681 7.50e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cB 76 73 0.4267 0.4211 0.4384 9.28e-19 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cD 73 73 0.4267 0.4384 0.4384 1.00e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
21 1ndd-a5-m1-cC 73 73 0.4267 0.4384 0.4384 1.00e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD
22 1ndd-a5-m1-cA 74 73 0.4267 0.4324 0.4384 1.04e-18 1ndd-a5-m1-cD_1ndd-a5-m1-cA
23 2wyq-a1-m2-cA 77 75 0.2933 0.2857 0.2933 6.02e-07 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 75 0.2933 0.2857 0.2933 6.02e-07 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cB 75 56 0.2133 0.2133 0.2857 4.14e-04 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cA 85 56 0.2133 0.1882 0.2857 4.42e-04 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 4a20-a1-m2-cA 80 63 0.2533 0.2375 0.3016 0.44 4a20-a1-m1-cA_4a20-a1-m2-cA
28 4a20-a1-m1-cA 80 63 0.2533 0.2375 0.3016 0.44 4a20-a1-m1-cA_4a20-a1-m2-cA
29 6bxz-a1-m1-cA 317 51 0.2133 0.0505 0.3137 0.60 6bxz-a1-m1-cA_6bxz-a1-m1-cC
30 3auf-a1-m2-cA 212 36 0.1867 0.0660 0.3889 0.84 3auf-a1-m1-cA_3auf-a1-m2-cA
31 3auf-a1-m1-cA 212 36 0.1867 0.0660 0.3889 0.84 3auf-a1-m1-cA_3auf-a1-m2-cA
32 6agi-a1-m1-cA 303 45 0.2267 0.0561 0.3778 1.5 6agi-a1-m1-cA_6agi-a1-m1-cB
33 3qa8-a2-m1-cH 541 60 0.2000 0.0277 0.2500 2.0 3qa8-a2-m1-cH_3qa8-a2-m1-cE
34 3qa8-a2-m1-cF 622 60 0.2000 0.0241 0.2500 2.1 3qa8-a2-m1-cE_3qa8-a2-m1-cF
35 3qa8-a2-m1-cE 622 60 0.2000 0.0241 0.2500 2.1 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
36 6agi-a1-m1-cB 322 45 0.2267 0.0528 0.3778 2.2 6agi-a1-m1-cA_6agi-a1-m1-cB
37 5lnl-a1-m1-cB 132 42 0.1733 0.0985 0.3095 2.6 5lnl-a1-m1-cB_5lnl-a1-m1-cC
38 5lnl-a1-m1-cC 133 42 0.1733 0.0977 0.3095 2.9 5lnl-a1-m1-cB_5lnl-a1-m1-cC
39 6h56-a1-m1-cA 181 33 0.1867 0.0773 0.4242 3.1 6h56-a1-m1-cB_6h56-a1-m1-cA
40 6h56-a1-m1-cB 179 33 0.1867 0.0782 0.4242 3.4 6h56-a1-m1-cB_6h56-a1-m1-cA
41 4kik-a1-m1-cA 618 31 0.1467 0.0178 0.3548 5.6 4kik-a1-m1-cA_4kik-a1-m1-cB
42 4kik-a1-m1-cB 648 31 0.1467 0.0170 0.3548 6.1 4kik-a1-m1-cA_4kik-a1-m1-cB
43 6bxz-a1-m1-cC 334 43 0.1867 0.0419 0.3256 6.2 6bxz-a1-m1-cA_6bxz-a1-m1-cC
44 4e3c-a3-m1-cE 624 31 0.1467 0.0176 0.3548 6.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE
45 4e3c-a3-m1-cD 624 31 0.1467 0.0176 0.3548 6.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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