Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=92)
GSMRTEKDIENYLKKKTKGLCLKFTSPGTIGVPDRIVVMNTGTFFVEVKAPGKKPRPSQV
AMHKKIKEAGQHVWVVDSYESVDMALKEMENW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qbo-a1-m2-cA 92 92 1.0000 1.0000 1.0000 1.51e-65 4qbo-a1-m1-cA_4qbo-a1-m2-cA
2 4qbo-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.51e-65 4qbo-a1-m1-cA_4qbo-a1-m2-cA
3 4qbn-a2-m3-cB 93 83 0.3152 0.3118 0.3494 1.16e-08 4qbn-a2-m1-cB_4qbn-a2-m3-cB
4 4qbn-a2-m1-cB 93 83 0.3152 0.3118 0.3494 1.16e-08 4qbn-a2-m1-cB_4qbn-a2-m3-cB
5 1o57-a2-m1-cC 269 79 0.1957 0.0669 0.2278 0.095 1o57-a2-m1-cC_1o57-a2-m1-cD
6 1o57-a2-m1-cD 270 79 0.1957 0.0667 0.2278 0.10 1o57-a2-m1-cC_1o57-a2-m1-cD
7 3vcy-a5-m1-cD 419 65 0.2391 0.0525 0.3385 0.23 3vcy-a5-m1-cA_3vcy-a5-m1-cD, 3vcy-a5-m1-cB_3vcy-a5-m1-cD, 3vcy-a5-m1-cC_3vcy-a5-m1-cD
8 3vcy-a5-m1-cC 419 65 0.2391 0.0525 0.3385 0.23 3vcy-a5-m1-cC_3vcy-a5-m1-cD
9 3vcy-a5-m1-cB 419 65 0.2391 0.0525 0.3385 0.23 3vcy-a5-m1-cB_3vcy-a5-m1-cD
10 3vcy-a5-m1-cA 419 65 0.2391 0.0525 0.3385 0.23 3vcy-a5-m1-cA_3vcy-a5-m1-cD
11 5bq2-a1-m1-cD 424 59 0.2174 0.0472 0.3390 0.38 5bq2-a1-m1-cA_5bq2-a1-m1-cD, 5bq2-a1-m1-cB_5bq2-a1-m1-cD, 5bq2-a1-m1-cC_5bq2-a1-m1-cD
12 5bq2-a1-m1-cC 424 59 0.2174 0.0472 0.3390 0.38 5bq2-a1-m1-cC_5bq2-a1-m1-cD
13 5bq2-a1-m1-cB 424 59 0.2174 0.0472 0.3390 0.38 5bq2-a1-m1-cB_5bq2-a1-m1-cD
14 5bq2-a1-m1-cA 424 59 0.2174 0.0472 0.3390 0.38 5bq2-a1-m1-cA_5bq2-a1-m1-cD
15 2dy0-a1-m1-cA 182 53 0.1848 0.0934 0.3208 1.9 2dy0-a1-m1-cB_2dy0-a1-m1-cA
16 2dy0-a1-m1-cB 181 53 0.1848 0.0939 0.3208 1.9 2dy0-a1-m1-cB_2dy0-a1-m1-cA
17 4r7u-a1-m1-cC 419 65 0.2174 0.0477 0.3077 2.4 4r7u-a1-m1-cD_4r7u-a1-m1-cC
18 4r7u-a1-m1-cD 418 65 0.2174 0.0478 0.3077 2.4 4r7u-a1-m1-cA_4r7u-a1-m1-cD, 4r7u-a1-m1-cB_4r7u-a1-m1-cD, 4r7u-a1-m1-cD_4r7u-a1-m1-cC
19 4r7u-a1-m1-cB 418 65 0.2174 0.0478 0.3077 2.4 4r7u-a1-m1-cB_4r7u-a1-m1-cD
20 4r7u-a1-m1-cA 418 65 0.2174 0.0478 0.3077 2.4 4r7u-a1-m1-cA_4r7u-a1-m1-cD
21 7pcy-a1-m4-cA 98 23 0.1196 0.1122 0.4783 2.8 7pcy-a1-m3-cA_7pcy-a1-m4-cA
22 7pcy-a1-m3-cA 98 23 0.1196 0.1122 0.4783 2.8 7pcy-a1-m3-cA_7pcy-a1-m4-cA
23 3la4-a1-m6-cA 833 47 0.1630 0.0180 0.3191 3.5 3la4-a1-m1-cA_3la4-a1-m6-cA
24 3la4-a1-m1-cA 833 47 0.1630 0.0180 0.3191 3.5 3la4-a1-m1-cA_3la4-a1-m6-cA
25 4ce0-a1-m2-cA 213 33 0.1304 0.0563 0.3636 8.8 4ce0-a1-m1-cA_4ce0-a1-m2-cA
26 4ce0-a1-m1-cA 213 33 0.1304 0.0563 0.3636 8.8 4ce0-a1-m1-cA_4ce0-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600