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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
GSNNELYLELMKLREHSDQHVKELKTSLKKCARETADLKFLNNQYAHKLKLLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fcn-a1-m1-cA 54 53 1.0000 0.9815 1.0000 1.52e-32 5fcn-a1-m1-cB_5fcn-a1-m1-cA
2 5fcn-a1-m1-cB 53 53 1.0000 1.0000 1.0000 1.62e-32 5fcn-a1-m1-cB_5fcn-a1-m1-cA
3 7bji-a2-m1-cB 92 51 0.5283 0.3043 0.5490 1.18e-12 7bji-a2-m1-cD_7bji-a2-m1-cB
4 7bji-a2-m1-cD 90 51 0.5283 0.3111 0.5490 1.23e-12 7bji-a2-m1-cD_7bji-a2-m1-cB
5 8dtc-a1-m1-cB 374 38 0.2642 0.0374 0.3684 0.018 8dtc-a1-m1-cA_8dtc-a1-m1-cB
6 8dtc-a1-m1-cA 374 38 0.2642 0.0374 0.3684 0.018 8dtc-a1-m1-cA_8dtc-a1-m1-cB
7 2r6e-a1-m3-cB 387 28 0.2264 0.0310 0.4286 3.5 2r6e-a1-m1-cA_2r6e-a1-m3-cB, 2r6e-a1-m2-cA_2r6e-a1-m3-cB, 2r6e-a1-m3-cA_2r6e-a1-m3-cB
8 2r6e-a1-m3-cA 387 28 0.2264 0.0310 0.4286 3.5 2r6e-a1-m3-cA_2r6e-a1-m3-cB
9 2r6e-a1-m2-cA 387 28 0.2264 0.0310 0.4286 3.5 2r6e-a1-m2-cA_2r6e-a1-m3-cB
10 2r6e-a1-m1-cA 387 28 0.2264 0.0310 0.4286 3.5 2r6e-a1-m1-cA_2r6e-a1-m3-cB
11 1sd4-a1-m1-cB 118 29 0.2264 0.1017 0.4138 3.8 1sd4-a1-m1-cA_1sd4-a1-m1-cB
12 1sd4-a1-m1-cA 118 29 0.2264 0.1017 0.4138 3.8 1sd4-a1-m1-cA_1sd4-a1-m1-cB
13 1xsd-a1-m2-cA 125 29 0.2264 0.0960 0.4138 4.1 1xsd-a1-m1-cA_1xsd-a1-m2-cA
14 1xsd-a1-m1-cA 125 29 0.2264 0.0960 0.4138 4.1 1xsd-a1-m1-cA_1xsd-a1-m2-cA
15 2r6a-a1-m3-cA 420 28 0.2264 0.0286 0.4286 4.4 2r6a-a1-m1-cB_2r6a-a1-m3-cA, 2r6a-a1-m3-cB_2r6a-a1-m3-cA
16 2vye-a1-m3-cB 380 32 0.2642 0.0368 0.4375 5.5 2vye-a1-m3-cB_2vye-a1-m2-cA, 2vye-a1-m3-cB_2vye-a1-m3-cA
17 6l5j-a2-m1-cC 204 31 0.2453 0.0637 0.4194 6.6 6l5j-a2-m1-cD_6l5j-a2-m1-cC
18 6l5j-a2-m1-cD 197 31 0.2453 0.0660 0.4194 7.0 6l5j-a2-m1-cD_6l5j-a2-m1-cC
19 2vye-a1-m3-cA 424 32 0.2642 0.0330 0.4375 8.3 2vye-a1-m3-cB_2vye-a1-m3-cA
20 2vye-a1-m2-cA 424 32 0.2642 0.0330 0.4375 8.3 2vye-a1-m3-cB_2vye-a1-m2-cA
21 7q5s-a1-m1-cK 2039 29 0.2830 0.0074 0.5172 8.7 7q5s-a1-m1-cI_7q5s-a1-m1-cK
22 7q5s-a1-m1-cI 2039 29 0.2830 0.0074 0.5172 8.7 7q5s-a1-m1-cI_7q5s-a1-m1-cK
23 4esv-a2-m1-cK 421 32 0.2453 0.0309 0.4062 9.6 4esv-a2-m1-cJ_4esv-a2-m1-cK, 4esv-a2-m1-cL_4esv-a2-m1-cK
24 4esv-a2-m1-cL 419 32 0.2453 0.0310 0.4062 9.9 4esv-a2-m1-cL_4esv-a2-m1-cG, 4esv-a2-m1-cL_4esv-a2-m1-cK
25 4esv-a2-m1-cG 421 32 0.2453 0.0309 0.4062 9.9 4esv-a2-m1-cG_4esv-a2-m1-cH, 4esv-a2-m1-cL_4esv-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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