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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GSPDPEIFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAI
LPKELQTWVRDHHPENGEEAVTVLEDLESELDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lhr-a1-m1-cB 93 93 1.0000 1.0000 1.0000 4.58e-64 3lhr-a1-m1-cA_3lhr-a1-m1-cB
2 3lhr-a1-m1-cA 92 92 0.9892 1.0000 1.0000 3.20e-63 3lhr-a1-m1-cA_3lhr-a1-m1-cB
3 1y7q-a1-m1-cB 98 87 0.5484 0.5204 0.5862 4.41e-32 1y7q-a1-m1-cA_1y7q-a1-m1-cB
4 1y7q-a1-m1-cA 98 87 0.5484 0.5204 0.5862 4.41e-32 1y7q-a1-m1-cA_1y7q-a1-m1-cB
5 2fi2-a1-m1-cB 94 88 0.5054 0.5000 0.5341 9.75e-28 2fi2-a1-m1-cA_2fi2-a1-m1-cB
6 2fi2-a1-m1-cA 94 88 0.5054 0.5000 0.5341 9.75e-28 2fi2-a1-m1-cA_2fi2-a1-m1-cB
7 4e6s-a1-m2-cA 85 83 0.4301 0.4706 0.4819 3.15e-22 4e6s-a1-m1-cA_4e6s-a1-m2-cA
8 4e6s-a1-m1-cA 85 83 0.4301 0.4706 0.4819 3.15e-22 4e6s-a1-m1-cA_4e6s-a1-m2-cA
9 4l8e-a1-m2-cA 203 31 0.1183 0.0542 0.3548 0.42 4l8e-a1-m1-cA_4l8e-a1-m2-cA
10 4l8e-a1-m1-cA 203 31 0.1183 0.0542 0.3548 0.42 4l8e-a1-m1-cA_4l8e-a1-m2-cA
11 2hiy-a1-m1-cD 180 77 0.2258 0.1167 0.2727 4.5 2hiy-a1-m1-cB_2hiy-a1-m1-cD
12 1y4u-a1-m1-cA 472 56 0.1720 0.0339 0.2857 4.6 1y4u-a1-m1-cB_1y4u-a1-m1-cA
13 1y4u-a1-m1-cB 454 56 0.1720 0.0352 0.2857 4.7 1y4u-a1-m1-cB_1y4u-a1-m1-cA
14 2hiy-a1-m1-cB 177 77 0.2258 0.1186 0.2727 4.9 2hiy-a1-m1-cB_2hiy-a1-m1-cD
15 2iop-a5-m1-cC 606 56 0.1720 0.0264 0.2857 5.0 2iop-a5-m1-cC_2iop-a5-m1-cB
16 2iop-a3-m1-cC 606 56 0.1720 0.0264 0.2857 5.0 2iop-a3-m1-cD_2iop-a3-m1-cC
17 1y4s-a1-m1-cB 475 56 0.1720 0.0337 0.2857 5.0 1y4s-a1-m1-cA_1y4s-a1-m1-cB
18 1y4s-a1-m1-cA 475 56 0.1720 0.0337 0.2857 5.0 1y4s-a1-m1-cA_1y4s-a1-m1-cB
19 2iop-a5-m1-cB 615 56 0.1720 0.0260 0.2857 5.1 2iop-a5-m1-cC_2iop-a5-m1-cB
20 2iop-a3-m1-cB 615 56 0.1720 0.0260 0.2857 5.1 2iop-a3-m1-cD_2iop-a3-m1-cB
21 2iop-a3-m1-cD 604 56 0.1720 0.0265 0.2857 5.2 2iop-a3-m1-cD_2iop-a3-m1-cB, 2iop-a3-m1-cD_2iop-a3-m1-cC
22 2ioq-a2-m3-cB 577 56 0.1720 0.0277 0.2857 5.5 2ioq-a2-m1-cB_2ioq-a2-m3-cB
23 2ioq-a2-m1-cB 577 56 0.1720 0.0277 0.2857 5.5 2ioq-a2-m1-cB_2ioq-a2-m3-cB
24 1zb7-a2-m4-cA 414 32 0.1075 0.0242 0.3125 5.7 1zb7-a2-m2-cA_1zb7-a2-m4-cA, 1zb7-a2-m3-cA_1zb7-a2-m4-cA
25 1zb7-a2-m3-cA 414 32 0.1075 0.0242 0.3125 5.7 1zb7-a2-m3-cA_1zb7-a2-m4-cA
26 1zb7-a2-m2-cA 414 32 0.1075 0.0242 0.3125 5.7 1zb7-a2-m2-cA_1zb7-a2-m4-cA
27 3gzs-a2-m1-cB 481 25 0.0860 0.0166 0.3200 6.8 3gzs-a2-m1-cA_3gzs-a2-m1-cB
28 3gzs-a2-m1-cA 481 25 0.0860 0.0166 0.3200 6.8 3gzs-a2-m1-cA_3gzs-a2-m1-cB
29 1z47-a1-m2-cB 342 41 0.1828 0.0497 0.4146 7.6 1z47-a1-m1-cB_1z47-a1-m2-cB
30 1z47-a1-m1-cB 342 41 0.1828 0.0497 0.4146 7.6 1z47-a1-m1-cB_1z47-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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