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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
GSPEYLSDEIFSAINNNLPHAYFKNLLFRLVANDRSELSDLGTLIKDNLKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p63-a3-m1-cA 51 51 1.0000 1.0000 1.0000 1.30e-31 2p63-a3-m1-cB_2p63-a3-m1-cA
2 2p63-a3-m1-cB 50 50 0.9804 1.0000 1.0000 1.21e-30 2p63-a3-m1-cB_2p63-a3-m1-cA
3 2p63-a1-m1-cB 50 50 0.9804 1.0000 1.0000 1.21e-30 2p63-a1-m1-cB_2p63-a1-m1-cD
4 2p63-a1-m1-cD 50 49 0.9608 0.9800 1.0000 5.22e-30 2p63-a1-m1-cB_2p63-a1-m1-cD
5 8b0i-a1-m1-cC 242 42 0.3137 0.0661 0.3810 4.1 8b0i-a1-m1-cC_8b0i-a1-m1-cD
6 7y8s-a1-m1-cA 275 27 0.2157 0.0400 0.4074 6.5 7y8s-a1-m1-cA_7y8s-a1-m1-cB
7 7y8s-a1-m1-cB 288 27 0.2157 0.0382 0.4074 6.6 7y8s-a1-m1-cA_7y8s-a1-m1-cB
8 1yoe-a4-m6-cA 302 46 0.2549 0.0430 0.2826 7.7 1yoe-a4-m3-cA_1yoe-a4-m6-cA, 1yoe-a4-m5-cA_1yoe-a4-m6-cA
9 1yoe-a4-m5-cA 302 46 0.2549 0.0430 0.2826 7.7 1yoe-a4-m5-cA_1yoe-a4-m6-cA
10 1yoe-a4-m3-cA 302 46 0.2549 0.0430 0.2826 7.7 1yoe-a4-m3-cA_1yoe-a4-m6-cA
11 1yoe-a1-m4-cA 302 46 0.2549 0.0430 0.2826 7.7 1yoe-a1-m3-cA_1yoe-a1-m4-cA
12 1yoe-a1-m3-cA 302 46 0.2549 0.0430 0.2826 7.7 1yoe-a1-m3-cA_1yoe-a1-m4-cA
13 8b0i-a1-m1-cD 282 22 0.2157 0.0390 0.5000 7.9 8b0i-a1-m1-cC_8b0i-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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