Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
GSPLAQQIKNILSLISQADAAGRMDEVRTLQLNLCQLMVEYFQGSPLAQQIKNIHSFGHQ
AWAAGRLDEVLTIQENLYQLMKEYFQQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bww-a5-m1-cD 88 88 1.0000 1.0000 1.0000 1.82e-61 7bww-a5-m1-cC_7bww-a5-m1-cD, 7bww-a5-m1-cD_7bww-a5-m1-cA
2 7bww-a5-m1-cC 86 86 0.9773 1.0000 1.0000 7.56e-60 7bww-a5-m1-cC_7bww-a5-m1-cD
3 7bww-a5-m1-cC 86 45 0.3750 0.3837 0.7333 1.23e-13 7bww-a5-m1-cC_7bww-a5-m1-cD
4 7bww-a5-m1-cA 90 89 1.0000 0.9778 0.9888 1.10e-59 7bww-a5-m1-cD_7bww-a5-m1-cA
5 5od9-a1-m1-cA 95 94 0.7273 0.6737 0.6809 7.91e-36 5od9-a1-m1-cB_5od9-a1-m1-cA
6 5od9-a1-m1-cB 88 88 0.6932 0.6932 0.6932 1.26e-33 5od9-a1-m1-cB_5od9-a1-m1-cA
7 5od9-a1-m1-cB 88 44 0.3409 0.3409 0.6818 3.89e-13 5od9-a1-m1-cB_5od9-a1-m1-cA
8 3v1c-a1-m1-cB 47 45 0.4318 0.8085 0.8444 7.46e-22 3v1c-a1-m1-cA_3v1c-a1-m1-cB
9 3v1c-a1-m1-cB 47 45 0.4205 0.7872 0.8222 8.11e-19 3v1c-a1-m1-cA_3v1c-a1-m1-cB
10 3v1c-a1-m1-cA 46 45 0.4318 0.8261 0.8444 7.79e-22 3v1c-a1-m1-cA_3v1c-a1-m1-cB
11 3v1c-a1-m1-cA 46 45 0.4205 0.8043 0.8222 7.76e-19 3v1c-a1-m1-cA_3v1c-a1-m1-cB
12 3v1b-a1-m1-cA 46 45 0.4318 0.8261 0.8444 7.79e-22 3v1b-a1-m1-cA_3v1b-a1-m1-cB
13 3v1b-a1-m1-cA 46 45 0.4205 0.8043 0.8222 7.76e-19 3v1b-a1-m1-cA_3v1b-a1-m1-cB
14 3v1d-a4-m1-cH 48 45 0.4318 0.7917 0.8444 8.89e-22 3v1d-a4-m1-cE_3v1d-a4-m1-cH
15 3v1d-a4-m1-cH 48 45 0.4205 0.7708 0.8222 9.45e-19 3v1d-a4-m1-cE_3v1d-a4-m1-cH
16 3v1d-a4-m1-cE 48 45 0.4318 0.7917 0.8444 8.89e-22 3v1d-a4-m1-cE_3v1d-a4-m1-cH
17 3v1d-a4-m1-cE 48 45 0.4205 0.7708 0.8222 9.45e-19 3v1d-a4-m1-cE_3v1d-a4-m1-cH
18 3v1b-a1-m1-cB 48 45 0.4318 0.7917 0.8444 8.89e-22 3v1b-a1-m1-cA_3v1b-a1-m1-cB
19 3v1b-a1-m1-cB 48 45 0.4205 0.7708 0.8222 9.45e-19 3v1b-a1-m1-cA_3v1b-a1-m1-cB
20 3j6d-a1-m1-cv 148 42 0.1705 0.1014 0.3571 1.5 3j6d-a1-m1-cu_3j6d-a1-m1-cv
21 3j6d-a1-m1-cu 148 42 0.1705 0.1014 0.3571 1.5 3j6d-a1-m1-cu_3j6d-a1-m1-cv
22 4uzs-a1-m1-cB 679 19 0.1023 0.0133 0.4737 2.5 4uzs-a1-m1-cB_4uzs-a1-m1-cC
23 4uzs-a1-m1-cC 683 19 0.1023 0.0132 0.4737 2.5 4uzs-a1-m1-cB_4uzs-a1-m1-cC
24 3r2g-a2-m4-cA 323 30 0.1250 0.0341 0.3667 5.3 3r2g-a2-m2-cA_3r2g-a2-m4-cA
25 3r2g-a2-m2-cA 323 30 0.1250 0.0341 0.3667 5.3 3r2g-a2-m2-cA_3r2g-a2-m4-cA
26 6ggo-a1-m1-cA 199 37 0.1364 0.0603 0.3243 6.8 6ggo-a1-m1-cB_6ggo-a1-m1-cA
27 6tgz-a1-m2-cF 352 73 0.2045 0.0511 0.2466 9.0 6tgz-a1-m1-cF_6tgz-a1-m2-cF
28 6tgz-a1-m1-cF 352 73 0.2045 0.0511 0.2466 9.0 6tgz-a1-m1-cF_6tgz-a1-m2-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600