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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
GSPLAQQIKNTLTFIGQANAAGRMDEVRTLQENLHPLWHEYFQQTEGSGGSPLAQQIEYG
HVLIHQARAAGRMDEVRRLSENTLQLMKEYFQQSD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5od9-a1-m1-cA 95 95 1.0000 1.0000 1.0000 9.05e-68 5od9-a1-m1-cB_5od9-a1-m1-cA
2 5od9-a1-m1-cB 88 92 0.9263 1.0000 0.9565 7.49e-60 5od9-a1-m1-cB_5od9-a1-m1-cA
3 5od9-a1-m1-cB 88 45 0.2947 0.3182 0.6222 2.59e-10 5od9-a1-m1-cB_5od9-a1-m1-cA
4 7bww-a5-m1-cA 90 94 0.6842 0.7222 0.6915 1.24e-36 7bww-a5-m1-cD_7bww-a5-m1-cA
5 7bww-a5-m1-cD 88 94 0.6737 0.7273 0.6809 8.54e-36 7bww-a5-m1-cC_7bww-a5-m1-cD, 7bww-a5-m1-cD_7bww-a5-m1-cA
6 7bww-a5-m1-cC 86 92 0.6526 0.7209 0.6739 3.07e-34 7bww-a5-m1-cC_7bww-a5-m1-cD
7 7bww-a5-m1-cC 86 45 0.3263 0.3605 0.6889 5.61e-14 7bww-a5-m1-cC_7bww-a5-m1-cD
8 3v1c-a1-m1-cB 47 46 0.3895 0.7872 0.8043 3.03e-21 3v1c-a1-m1-cA_3v1c-a1-m1-cB
9 3v1c-a1-m1-cB 47 47 0.3684 0.7447 0.7447 2.75e-18 3v1c-a1-m1-cA_3v1c-a1-m1-cB
10 3v1c-a1-m1-cA 46 46 0.3895 0.8043 0.8043 3.86e-21 3v1c-a1-m1-cA_3v1c-a1-m1-cB
11 3v1c-a1-m1-cA 46 46 0.3684 0.7609 0.7609 3.61e-18 3v1c-a1-m1-cA_3v1c-a1-m1-cB
12 3v1b-a1-m1-cA 46 46 0.3895 0.8043 0.8043 3.86e-21 3v1b-a1-m1-cA_3v1b-a1-m1-cB
13 3v1b-a1-m1-cA 46 46 0.3684 0.7609 0.7609 3.61e-18 3v1b-a1-m1-cA_3v1b-a1-m1-cB
14 3v1d-a4-m1-cH 48 46 0.3895 0.7708 0.8043 3.94e-21 3v1d-a4-m1-cE_3v1d-a4-m1-cH
15 3v1d-a4-m1-cH 48 46 0.3684 0.7292 0.7609 3.61e-18 3v1d-a4-m1-cE_3v1d-a4-m1-cH
16 3v1d-a4-m1-cE 48 46 0.3895 0.7708 0.8043 3.94e-21 3v1d-a4-m1-cE_3v1d-a4-m1-cH
17 3v1d-a4-m1-cE 48 46 0.3684 0.7292 0.7609 3.61e-18 3v1d-a4-m1-cE_3v1d-a4-m1-cH
18 3v1b-a1-m1-cB 48 46 0.3895 0.7708 0.8043 3.94e-21 3v1b-a1-m1-cA_3v1b-a1-m1-cB
19 3v1b-a1-m1-cB 48 46 0.3684 0.7292 0.7609 3.61e-18 3v1b-a1-m1-cA_3v1b-a1-m1-cB
20 1r8q-a5-m3-cB 179 17 0.0947 0.0503 0.5294 0.95 1r8q-a5-m1-cA_1r8q-a5-m3-cB
21 1r8q-a5-m1-cA 179 17 0.0947 0.0503 0.5294 0.95 1r8q-a5-m1-cA_1r8q-a5-m3-cB
22 6mok-a1-m2-cA 289 48 0.1684 0.0554 0.3333 1.5 6mok-a1-m1-cA_6mok-a1-m2-cA
23 6mok-a1-m1-cA 289 48 0.1684 0.0554 0.3333 1.5 6mok-a1-m1-cA_6mok-a1-m2-cA
24 6cri-a1-m1-cV 163 27 0.1158 0.0675 0.4074 3.3 6cri-a1-m1-cU_6cri-a1-m1-cV
25 6cri-a1-m1-cU 163 27 0.1158 0.0675 0.4074 3.3 6cri-a1-m1-cU_6cri-a1-m1-cV
26 3q2k-a2-m1-cL 321 43 0.1579 0.0467 0.3488 4.6 3q2k-a2-m1-cL_3q2k-a2-m1-cK
27 7wqy-a1-m1-cA 174 14 0.0842 0.0460 0.5714 5.7 7wqy-a1-m2-cB_7wqy-a1-m1-cA
28 3o47-a2-m3-cB 289 12 0.0842 0.0277 0.6667 7.6 3o47-a2-m1-cB_3o47-a2-m3-cB
29 3o47-a2-m1-cB 289 12 0.0842 0.0277 0.6667 7.6 3o47-a2-m1-cB_3o47-a2-m3-cB
30 3lrp-a2-m2-cA 181 17 0.0737 0.0387 0.4118 8.6 3lrp-a2-m1-cA_3lrp-a2-m2-cA
31 3lrp-a2-m1-cA 181 17 0.0737 0.0387 0.4118 8.6 3lrp-a2-m1-cA_3lrp-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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