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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
GSPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2knv-a1-m1-cB 52 52 1.0000 1.0000 1.0000 5.98e-34 2knv-a1-m1-cA_2knv-a1-m1-cB
2 2knv-a1-m1-cA 52 52 1.0000 1.0000 1.0000 5.98e-34 2knv-a1-m1-cA_2knv-a1-m1-cB
3 3b0f-a1-m1-cB 43 43 0.8269 1.0000 1.0000 2.04e-26 3b0f-a1-m1-cA_3b0f-a1-m1-cB
4 3b0f-a1-m1-cA 43 43 0.8269 1.0000 1.0000 2.04e-26 3b0f-a1-m1-cA_3b0f-a1-m1-cB
5 2zcw-a1-m2-cA 193 42 0.2692 0.0725 0.3333 1.1 2zcw-a1-m1-cA_2zcw-a1-m2-cA
6 2zcw-a1-m1-cA 193 42 0.2692 0.0725 0.3333 1.1 2zcw-a1-m1-cA_2zcw-a1-m2-cA
7 1gxr-a1-m1-cB 324 38 0.2115 0.0340 0.2895 2.5 1gxr-a1-m1-cB_1gxr-a1-m1-cA
8 3o2k-a1-m2-cA 429 55 0.2885 0.0350 0.2727 2.6 3o2k-a1-m1-cA_3o2k-a1-m2-cA
9 3o2k-a1-m1-cA 429 55 0.2885 0.0350 0.2727 2.6 3o2k-a1-m1-cA_3o2k-a1-m2-cA
10 4d0m-a3-m1-cc 470 24 0.1923 0.0213 0.4167 3.9 4d0m-a3-m1-cW_4d0m-a3-m1-cc
11 4d0m-a3-m1-cW 470 24 0.1923 0.0213 0.4167 3.9 4d0m-a3-m1-cW_4d0m-a3-m1-cc
12 5u3f-a1-m1-cB 328 32 0.2115 0.0335 0.3438 4.8 5u3f-a1-m1-cA_5u3f-a1-m1-cB
13 5u3f-a1-m1-cA 326 32 0.2115 0.0337 0.3438 5.1 5u3f-a1-m1-cA_5u3f-a1-m1-cB
14 1gxr-a1-m1-cA 335 26 0.1538 0.0239 0.3077 8.2 1gxr-a1-m1-cB_1gxr-a1-m1-cA
15 3jz6-a1-m1-cB 363 32 0.2115 0.0303 0.3438 8.8 3jz6-a1-m1-cA_3jz6-a1-m1-cB
16 3jz6-a1-m1-cA 363 32 0.2115 0.0303 0.3438 8.8 3jz6-a1-m1-cA_3jz6-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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