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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GSQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKIKQGYTYA
TIEQESGASTATISRVKRSLQWGNDAYTILDRNIET

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kor-a2-m1-cB 97 96 1.0000 0.9897 1.0000 8.00e-67 3kor-a2-m1-cC_3kor-a2-m1-cB
2 3kor-a2-m1-cC 96 96 1.0000 1.0000 1.0000 8.28e-67 3kor-a2-m1-cC_3kor-a2-m1-cB
3 3frw-a4-m1-cG 89 85 0.5104 0.5506 0.5765 1.58e-32 3frw-a4-m1-cG_3frw-a4-m1-cH
4 3frw-a4-m1-cH 90 85 0.5104 0.5444 0.5765 1.59e-32 3frw-a4-m1-cG_3frw-a4-m1-cH
5 3g1c-a1-m2-cA 97 83 0.4896 0.4845 0.5663 3.28e-28 3g1c-a1-m1-cA_3g1c-a1-m2-cA
6 3g1c-a1-m1-cA 97 83 0.4896 0.4845 0.5663 3.28e-28 3g1c-a1-m1-cA_3g1c-a1-m2-cA
7 1g8k-a6-m1-cC 822 62 0.1667 0.0195 0.2581 3.1 1g8k-a6-m1-cA_1g8k-a6-m1-cC
8 1g8k-a6-m1-cA 822 62 0.1667 0.0195 0.2581 3.1 1g8k-a6-m1-cA_1g8k-a6-m1-cC
9 3zkc-a1-m1-cB 63 38 0.0938 0.1429 0.2368 4.2 3zkc-a1-m1-cA_3zkc-a1-m1-cB
10 3zkc-a1-m1-cA 61 59 0.1250 0.1967 0.2034 4.7 3zkc-a1-m1-cA_3zkc-a1-m1-cB
11 1b0n-a6-m3-cA 103 38 0.0938 0.0874 0.2368 5.0 1b0n-a6-m1-cA_1b0n-a6-m3-cA
12 1b0n-a6-m1-cA 103 38 0.0938 0.0874 0.2368 5.0 1b0n-a6-m1-cA_1b0n-a6-m3-cA
13 1b0n-a5-m2-cA 103 38 0.0938 0.0874 0.2368 5.0 1b0n-a5-m1-cA_1b0n-a5-m2-cA
14 1b0n-a5-m1-cA 103 38 0.0938 0.0874 0.2368 5.0 1b0n-a5-m1-cA_1b0n-a5-m2-cA
15 3kt3-a2-m1-cC 403 75 0.1771 0.0422 0.2267 5.9 3kt3-a2-m1-cC_3kt3-a2-m1-cD
16 3kt3-a2-m1-cD 409 75 0.1771 0.0416 0.2267 5.9 3kt3-a2-m1-cC_3kt3-a2-m1-cD
17 4pp8-a1-m1-cB 125 32 0.1458 0.1120 0.4375 6.6 4pp8-a1-m1-cA_4pp8-a1-m1-cB
18 4pp8-a1-m1-cA 125 32 0.1458 0.1120 0.4375 6.6 4pp8-a1-m1-cA_4pp8-a1-m1-cB
19 7ab5-a1-m1-cD 70 43 0.1250 0.1714 0.2791 7.4 7ab5-a1-m1-cA_7ab5-a1-m1-cD
20 7ab5-a1-m1-cA 70 43 0.1250 0.1714 0.2791 7.4 7ab5-a1-m1-cA_7ab5-a1-m1-cD
21 3k9r-a5-m1-cC 103 16 0.0938 0.0874 0.5625 8.3 3k9r-a5-m1-cD_3k9r-a5-m1-cC
22 3k9r-a1-m2-cC 103 16 0.0938 0.0874 0.5625 8.3 3k9r-a1-m1-cB_3k9r-a1-m2-cC
23 3ilm-a2-m1-cD 121 16 0.0938 0.0744 0.5625 8.7 3ilm-a2-m1-cD_3ilm-a2-m1-cC
24 3k9r-a4-m1-cB 98 16 0.0938 0.0918 0.5625 9.0 3k9r-a4-m2-cD_3k9r-a4-m1-cB
25 3k9r-a1-m1-cB 98 16 0.0938 0.0918 0.5625 9.0 3k9r-a1-m1-cB_3k9r-a1-m2-cC
26 3ilm-a2-m1-cC 122 16 0.0938 0.0738 0.5625 9.1 3ilm-a2-m1-cD_3ilm-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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