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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
GSQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKIKQGYTYA
TIEQESGASTATISRVKRSLQWGNDAYTILDRNIETN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kor-a2-m1-cB 97 97 1.0000 1.0000 1.0000 1.21e-67 3kor-a2-m1-cC_3kor-a2-m1-cB
2 3kor-a2-m1-cC 96 96 0.9897 1.0000 1.0000 8.08e-67 3kor-a2-m1-cC_3kor-a2-m1-cB
3 3frw-a4-m1-cG 89 85 0.5052 0.5506 0.5765 1.71e-32 3frw-a4-m1-cG_3frw-a4-m1-cH
4 3frw-a4-m1-cH 90 85 0.5052 0.5444 0.5765 1.90e-32 3frw-a4-m1-cG_3frw-a4-m1-cH
5 3g1c-a1-m2-cA 97 83 0.4845 0.4845 0.5663 3.40e-28 3g1c-a1-m1-cA_3g1c-a1-m2-cA
6 3g1c-a1-m1-cA 97 83 0.4845 0.4845 0.5663 3.40e-28 3g1c-a1-m1-cA_3g1c-a1-m2-cA
7 1g8k-a6-m1-cC 822 62 0.1649 0.0195 0.2581 3.3 1g8k-a6-m1-cA_1g8k-a6-m1-cC
8 1g8k-a6-m1-cA 822 62 0.1649 0.0195 0.2581 3.3 1g8k-a6-m1-cA_1g8k-a6-m1-cC
9 3zkc-a1-m1-cB 63 59 0.1237 0.1905 0.2034 4.1 3zkc-a1-m1-cA_3zkc-a1-m1-cB
10 3zkc-a1-m1-cA 61 59 0.1237 0.1967 0.2034 4.6 3zkc-a1-m1-cA_3zkc-a1-m1-cB
11 1b0n-a6-m3-cA 103 38 0.0928 0.0874 0.2368 5.4 1b0n-a6-m1-cA_1b0n-a6-m3-cA
12 1b0n-a6-m1-cA 103 38 0.0928 0.0874 0.2368 5.4 1b0n-a6-m1-cA_1b0n-a6-m3-cA
13 1b0n-a5-m2-cA 103 38 0.0928 0.0874 0.2368 5.4 1b0n-a5-m1-cA_1b0n-a5-m2-cA
14 1b0n-a5-m1-cA 103 38 0.0928 0.0874 0.2368 5.4 1b0n-a5-m1-cA_1b0n-a5-m2-cA
15 3kt3-a2-m1-cC 403 75 0.1753 0.0422 0.2267 5.6 3kt3-a2-m1-cC_3kt3-a2-m1-cD
16 3kt3-a2-m1-cD 409 75 0.1753 0.0416 0.2267 5.9 3kt3-a2-m1-cC_3kt3-a2-m1-cD
17 7ab5-a1-m1-cD 70 43 0.1237 0.1714 0.2791 7.7 7ab5-a1-m1-cA_7ab5-a1-m1-cD
18 7ab5-a1-m1-cA 70 43 0.1237 0.1714 0.2791 7.7 7ab5-a1-m1-cA_7ab5-a1-m1-cD
19 4pp8-a1-m1-cB 125 32 0.1443 0.1120 0.4375 8.0 4pp8-a1-m1-cA_4pp8-a1-m1-cB
20 4pp8-a1-m1-cA 125 32 0.1443 0.1120 0.4375 8.0 4pp8-a1-m1-cA_4pp8-a1-m1-cB
21 3k9r-a5-m1-cC 103 16 0.0928 0.0874 0.5625 8.0 3k9r-a5-m1-cD_3k9r-a5-m1-cC
22 3k9r-a1-m2-cC 103 16 0.0928 0.0874 0.5625 8.0 3k9r-a1-m1-cB_3k9r-a1-m2-cC
23 3ilm-a2-m1-cD 121 16 0.0928 0.0744 0.5625 8.5 3ilm-a2-m1-cD_3ilm-a2-m1-cC
24 3k9r-a4-m1-cB 98 16 0.0928 0.0918 0.5625 8.5 3k9r-a4-m2-cD_3k9r-a4-m1-cB
25 3k9r-a1-m1-cB 98 16 0.0928 0.0918 0.5625 8.5 3k9r-a1-m1-cB_3k9r-a1-m2-cC
26 3ilm-a2-m1-cC 122 16 0.0928 0.0738 0.5625 8.6 3ilm-a2-m1-cD_3ilm-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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