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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
GSQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2loh-a1-m1-cB 43 43 1.0000 1.0000 1.0000 9.11e-23 2loh-a1-m1-cA_2loh-a1-m1-cB
2 2loh-a1-m1-cA 43 43 1.0000 1.0000 1.0000 9.11e-23 2loh-a1-m1-cA_2loh-a1-m1-cB
3 2lz3-a1-m1-cB 28 28 0.6512 1.0000 1.0000 2.09e-10 2lz3-a1-m1-cA_2lz3-a1-m1-cB
4 2lz3-a1-m1-cA 28 28 0.6512 1.0000 1.0000 2.09e-10 2lz3-a1-m1-cA_2lz3-a1-m1-cB
5 2lz4-a1-m1-cB 28 28 0.6279 0.9643 0.9643 6.40e-10 2lz4-a1-m1-cA_2lz4-a1-m1-cB
6 2lz4-a1-m1-cA 28 28 0.6279 0.9643 0.9643 6.40e-10 2lz4-a1-m1-cA_2lz4-a1-m1-cB
7 3moq-a5-m1-cD 126 25 0.5581 0.1905 0.9600 9.29e-10 3moq-a5-m1-cA_3moq-a5-m1-cD, 3moq-a5-m1-cB_3moq-a5-m1-cD, 3moq-a5-m1-cC_3moq-a5-m1-cD
8 3moq-a5-m1-cC 126 25 0.5581 0.1905 0.9600 9.29e-10 3moq-a5-m1-cC_3moq-a5-m1-cD
9 3moq-a5-m1-cB 126 25 0.5581 0.1905 0.9600 9.29e-10 3moq-a5-m1-cB_3moq-a5-m1-cD
10 3moq-a5-m1-cA 126 25 0.5581 0.1905 0.9600 9.29e-10 3moq-a5-m1-cA_3moq-a5-m1-cD
11 7jxn-a2-m1-cC 18 15 0.3488 0.8333 1.0000 4.70e-04 7jxn-a2-m1-cB_7jxn-a2-m1-cC
12 7jxn-a2-m1-cB 18 15 0.3488 0.8333 1.0000 4.70e-04 7jxn-a2-m1-cB_7jxn-a2-m1-cC
13 6oiz-a1-m5-cA 15 15 0.3488 1.0000 1.0000 6.07e-04 6oiz-a1-m4-cA_6oiz-a1-m5-cA
14 6oiz-a1-m4-cA 15 15 0.3488 1.0000 1.0000 6.07e-04 6oiz-a1-m4-cA_6oiz-a1-m5-cA
15 7u4p-a1-m4-cC 18 16 0.3256 0.7778 0.8750 0.001 7u4p-a1-m2-cB_7u4p-a1-m4-cC, 7u4p-a1-m3-cA_7u4p-a1-m4-cC
16 7u4p-a1-m4-cB 18 16 0.3256 0.7778 0.8750 0.001 7u4p-a1-m1-cA_7u4p-a1-m4-cB
17 7u4p-a1-m3-cA 18 16 0.3256 0.7778 0.8750 0.001 7u4p-a1-m3-cA_7u4p-a1-m4-cC
18 7u4p-a1-m2-cB 18 16 0.3256 0.7778 0.8750 0.001 7u4p-a1-m2-cB_7u4p-a1-m4-cC
19 7u4p-a1-m1-cA 18 16 0.3256 0.7778 0.8750 0.001 7u4p-a1-m1-cA_7u4p-a1-m4-cB
20 7jxo-a1-m4-cC 18 15 0.3256 0.7778 0.9333 0.001 7jxo-a1-m1-cB_7jxo-a1-m4-cC
21 7jxo-a1-m1-cB 18 15 0.3256 0.7778 0.9333 0.001 7jxo-a1-m1-cB_7jxo-a1-m4-cC
22 6nb9-a1-m9-cA 14 15 0.3256 1.0000 0.9333 0.42 6nb9-a1-m6-cA_6nb9-a1-m9-cA
23 6nb9-a1-m6-cA 14 15 0.3256 1.0000 0.9333 0.42 6nb9-a1-m6-cA_6nb9-a1-m9-cA
24 4ivh-a1-m4-cA 11 10 0.2093 0.8182 0.9000 3.4 4ivh-a1-m1-cA_4ivh-a1-m4-cA
25 4ivh-a1-m1-cA 11 10 0.2093 0.8182 0.9000 3.4 4ivh-a1-m1-cA_4ivh-a1-m4-cA
26 3wqy-a1-m1-cB 905 25 0.2093 0.0099 0.3600 9.0 3wqy-a1-m1-cA_3wqy-a1-m1-cB
27 3wqy-a1-m1-cA 905 25 0.2093 0.0099 0.3600 9.1 3wqy-a1-m1-cA_3wqy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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