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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
GSSGSSGNVDAKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFSGPSSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2do6-a1-m1-cB 53 53 1.0000 1.0000 1.0000 4.25e-32 2do6-a1-m1-cA_2do6-a1-m1-cB
2 2do6-a1-m1-cA 53 53 1.0000 1.0000 1.0000 4.25e-32 2do6-a1-m1-cA_2do6-a1-m1-cB
3 2d9s-a1-m1-cB 53 42 0.4528 0.4528 0.5714 1.05e-14 2d9s-a1-m1-cA_2d9s-a1-m1-cB
4 2d9s-a1-m1-cA 53 42 0.4528 0.4528 0.5714 1.05e-14 2d9s-a1-m1-cA_2d9s-a1-m1-cB
5 2oo9-a2-m2-cC 39 33 0.3019 0.4103 0.4848 4.59e-07 2oo9-a2-m1-cC_2oo9-a2-m2-cC
6 2oo9-a2-m1-cC 39 33 0.3019 0.4103 0.4848 4.59e-07 2oo9-a2-m1-cC_2oo9-a2-m2-cC
7 2w7n-a1-m1-cA 94 22 0.1698 0.0957 0.4091 1.6 2w7n-a1-m1-cA_2w7n-a1-m1-cB
8 2w7n-a1-m1-cB 95 22 0.1698 0.0947 0.4091 1.8 2w7n-a1-m1-cA_2w7n-a1-m1-cB
9 5ckt-a2-m1-cC 99 22 0.1698 0.0909 0.4091 1.9 5ckt-a2-m1-cB_5ckt-a2-m1-cC
10 5ckt-a2-m1-cB 99 22 0.1698 0.0909 0.4091 1.9 5ckt-a2-m1-cB_5ckt-a2-m1-cC
11 2n5g-a1-m1-cB 101 22 0.1698 0.0891 0.4091 2.1 2n5g-a1-m1-cA_2n5g-a1-m1-cB
12 2n5g-a1-m1-cA 101 22 0.1698 0.0891 0.4091 2.1 2n5g-a1-m1-cA_2n5g-a1-m1-cB
13 6xy9-a1-m1-cB 301 43 0.2642 0.0465 0.3256 2.3 6xy9-a1-m1-cB_6xy9-a1-m1-cA
14 2x40-a1-m2-cA 713 35 0.1887 0.0140 0.2857 2.6 2x40-a1-m1-cA_2x40-a1-m2-cA
15 2x40-a1-m1-cA 713 35 0.1887 0.0140 0.2857 2.6 2x40-a1-m1-cA_2x40-a1-m2-cA
16 8dht-a2-m2-cD 439 28 0.1698 0.0205 0.3214 3.0 8dht-a2-m1-cB_8dht-a2-m2-cD
17 8dht-a2-m1-cB 439 28 0.1698 0.0205 0.3214 3.0 8dht-a2-m1-cB_8dht-a2-m2-cD
18 7zkt-a2-m1-cC 198 39 0.2453 0.0657 0.3333 6.3 7zkt-a2-m1-cC_7zkt-a2-m1-cD
19 7zkt-a2-m1-cD 199 39 0.2453 0.0653 0.3333 6.4 7zkt-a2-m1-cC_7zkt-a2-m1-cD
20 4aoy-a2-m1-cC 371 38 0.2642 0.0377 0.3684 9.4 4aoy-a2-m1-cC_4aoy-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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