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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
GSSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hsh-a3-m4-cF 56 56 1.0000 1.0000 1.0000 7.18e-36 3hsh-a3-m1-cE_3hsh-a3-m4-cF
2 3hsh-a3-m4-cB 56 56 1.0000 1.0000 1.0000 7.18e-36 3hsh-a3-m4-cA_3hsh-a3-m4-cB
3 3hsh-a3-m4-cA 56 56 1.0000 1.0000 1.0000 7.18e-36 3hsh-a3-m4-cA_3hsh-a3-m4-cB
4 3hsh-a3-m4-cE 55 55 0.9821 1.0000 1.0000 3.56e-35 3hsh-a3-m2-cE_3hsh-a3-m4-cE
5 3hsh-a3-m2-cE 55 55 0.9821 1.0000 1.0000 3.56e-35 3hsh-a3-m2-cE_3hsh-a3-m4-cE
6 3hsh-a3-m1-cE 55 55 0.9821 1.0000 1.0000 3.56e-35 3hsh-a3-m1-cE_3hsh-a3-m4-cF
7 3n3f-a2-m5-cB 53 51 0.3036 0.3208 0.3333 1.47e-06 3n3f-a2-m4-cB_3n3f-a2-m5-cB
8 3n3f-a2-m4-cB 53 51 0.3036 0.3208 0.3333 1.47e-06 3n3f-a2-m4-cB_3n3f-a2-m5-cB
9 4nsv-a1-m1-cB 264 39 0.2321 0.0492 0.3333 1.1 4nsv-a1-m1-cA_4nsv-a1-m1-cB
10 4nsv-a1-m1-cA 264 39 0.2321 0.0492 0.3333 1.1 4nsv-a1-m1-cA_4nsv-a1-m1-cB
11 4dd5-a1-m4-cA 387 31 0.2143 0.0310 0.3871 2.8 4dd5-a1-m1-cA_4dd5-a1-m4-cA, 4dd5-a1-m2-cA_4dd5-a1-m4-cA, 4dd5-a1-m3-cA_4dd5-a1-m4-cA
12 4dd5-a1-m3-cA 387 31 0.2143 0.0310 0.3871 2.8 4dd5-a1-m3-cA_4dd5-a1-m4-cA
13 4dd5-a1-m2-cA 387 31 0.2143 0.0310 0.3871 2.8 4dd5-a1-m2-cA_4dd5-a1-m4-cA
14 4dd5-a1-m1-cA 387 31 0.2143 0.0310 0.3871 2.8 4dd5-a1-m1-cA_4dd5-a1-m4-cA
15 5jy7-a1-m1-cJ 435 24 0.2143 0.0276 0.5000 9.2 5jy7-a1-m1-cI_5jy7-a1-m1-cJ
16 5jy7-a1-m1-cI 435 24 0.2143 0.0276 0.5000 9.2 5jy7-a1-m1-cI_5jy7-a1-m1-cJ

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Reference:
Jacob Schwartz et al.

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