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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GSSRLPSLINGIMSSMQGGGFNYQNFGNVLSQFATGTGTCNSNDLNLLMDALLSALHTLS
YQGMGTVPSYPSPSAMSAYSQSVRRCFGY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vu7-a1-m1-cB 89 89 1.0000 1.0000 1.0000 2.42e-60 7vu7-a1-m1-cA_7vu7-a1-m1-cB
2 7vu7-a1-m1-cA 89 89 1.0000 1.0000 1.0000 2.42e-60 7vu7-a1-m1-cA_7vu7-a1-m1-cB
3 6h3w-a1-m3-cA 246 63 0.2022 0.0732 0.2857 0.13 6h3w-a1-m2-cA_6h3w-a1-m3-cA
4 6h3w-a1-m2-cA 246 63 0.2022 0.0732 0.2857 0.13 6h3w-a1-m2-cA_6h3w-a1-m3-cA
5 7ban-a1-m1-cB 1904 45 0.1573 0.0074 0.3111 0.76 7ban-a1-m1-cA_7ban-a1-m1-cB
6 7ban-a1-m1-cA 1904 45 0.1573 0.0074 0.3111 0.76 7ban-a1-m1-cA_7ban-a1-m1-cB
7 7m3k-a1-m4-cA 587 51 0.1685 0.0256 0.2941 1.2 7m3k-a1-m1-cA_7m3k-a1-m4-cA, 7m3k-a1-m2-cA_7m3k-a1-m4-cA, 7m3k-a1-m3-cA_7m3k-a1-m4-cA
8 7m3k-a1-m3-cA 587 51 0.1685 0.0256 0.2941 1.2 7m3k-a1-m3-cA_7m3k-a1-m4-cA
9 7m3k-a1-m2-cA 587 51 0.1685 0.0256 0.2941 1.2 7m3k-a1-m2-cA_7m3k-a1-m4-cA
10 7m3k-a1-m1-cA 587 51 0.1685 0.0256 0.2941 1.2 7m3k-a1-m1-cA_7m3k-a1-m4-cA
11 5oyn-a1-m1-cD 587 73 0.2135 0.0324 0.2603 4.8 5oyn-a1-m1-cC_5oyn-a1-m1-cD, 5oyn-a1-m1-cD_5oyn-a1-m1-cA, 5oyn-a1-m1-cD_5oyn-a1-m1-cB
12 5oyn-a1-m1-cC 587 73 0.2135 0.0324 0.2603 4.8 5oyn-a1-m1-cC_5oyn-a1-m1-cD
13 5oyn-a1-m1-cB 588 73 0.2135 0.0323 0.2603 4.9 5oyn-a1-m1-cD_5oyn-a1-m1-cB
14 5oyn-a1-m1-cA 588 73 0.2135 0.0323 0.2603 4.9 5oyn-a1-m1-cD_5oyn-a1-m1-cA
15 3fdb-a1-m2-cA 369 30 0.1236 0.0298 0.3667 5.9 3fdb-a1-m1-cA_3fdb-a1-m2-cA
16 3fdb-a1-m1-cA 369 30 0.1236 0.0298 0.3667 5.9 3fdb-a1-m1-cA_3fdb-a1-m2-cA
17 6u7a-a3-m1-cH 416 24 0.1124 0.0240 0.4167 7.2 6u7a-a3-m1-cH_6u7a-a3-m1-cE
18 6u78-a1-m1-cC 417 24 0.1124 0.0240 0.4167 7.7 6u78-a1-m1-cC_6u78-a1-m1-cA
19 6u78-a1-m1-cA 419 24 0.1124 0.0239 0.4167 8.0 6u78-a1-m1-cC_6u78-a1-m1-cA
20 6u7a-a3-m1-cE 423 24 0.1124 0.0236 0.4167 8.1 6u7a-a3-m1-cH_6u7a-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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