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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
GSTPDYLQLNDKKLSSLPNFSGIFNHLERLLDEEISRVRKDYNDTLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dnn-a1-m1-cB 47 47 1.0000 1.0000 1.0000 6.76e-29 4dnn-a1-m1-cA_4dnn-a1-m1-cB
2 4dnn-a1-m1-cA 46 46 0.9787 1.0000 1.0000 3.96e-28 4dnn-a1-m1-cA_4dnn-a1-m1-cB
3 2ymj-a1-m1-cB 52 42 0.7660 0.6923 0.8571 3.02e-17 2ymj-a1-m1-cA_2ymj-a1-m1-cB
4 2ymj-a1-m1-cA 52 42 0.7660 0.6923 0.8571 3.02e-17 2ymj-a1-m1-cA_2ymj-a1-m1-cB
5 4jvh-a2-m3-cA 168 43 0.7234 0.2024 0.7907 9.50e-15 4jvh-a2-m1-cA_4jvh-a2-m3-cA
6 4jvh-a2-m1-cA 168 43 0.7234 0.2024 0.7907 9.50e-15 4jvh-a2-m1-cA_4jvh-a2-m3-cA
7 4jvh-a1-m2-cA 168 43 0.7234 0.2024 0.7907 9.50e-15 4jvh-a1-m1-cA_4jvh-a1-m2-cA
8 4jvh-a1-m1-cA 168 43 0.7234 0.2024 0.7907 9.50e-15 4jvh-a1-m1-cA_4jvh-a1-m2-cA
9 4jvy-a1-m1-cB 190 38 0.3617 0.0895 0.4474 0.017 4jvy-a1-m1-cB_4jvy-a1-m1-cA
10 4jvy-a1-m1-cA 191 38 0.3617 0.0890 0.4474 0.017 4jvy-a1-m1-cB_4jvy-a1-m1-cA
11 7el3-a1-m1-cA 138 45 0.2979 0.1014 0.3111 0.73 7el3-a1-m1-cB_7el3-a1-m1-cA
12 7el3-a1-m1-cB 135 27 0.2128 0.0741 0.3704 0.75 7el3-a1-m1-cB_7el3-a1-m1-cA
13 3qfq-a1-m1-cE 117 44 0.1915 0.0769 0.2045 5.4 3qfq-a1-m1-cE_3qfq-a1-m1-cB
14 3qfq-a1-m1-cB 120 44 0.1915 0.0750 0.2045 6.0 3qfq-a1-m1-cE_3qfq-a1-m1-cB
15 4qww-a1-m1-cB 529 37 0.2766 0.0246 0.3514 7.9 4qww-a1-m1-cA_4qww-a1-m1-cB
16 4qww-a1-m1-cA 529 37 0.2766 0.0246 0.3514 7.9 4qww-a1-m1-cA_4qww-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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