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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFLG
EECSYYVNQSGIVTEKVKEIRDRIQRRAEELRN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ha6-a1-m4-cA 93 93 1.0000 1.0000 1.0000 1.27e-63 5ha6-a1-m2-cA_5ha6-a1-m4-cA
2 5ha6-a1-m2-cA 93 93 1.0000 1.0000 1.0000 1.27e-63 5ha6-a1-m2-cA_5ha6-a1-m4-cA
3 5ha6-a2-m5-cB 79 93 0.8495 1.0000 0.8495 4.02e-48 5ha6-a2-m3-cB_5ha6-a2-m5-cB
4 5ha6-a2-m3-cB 79 93 0.8495 1.0000 0.8495 4.02e-48 5ha6-a2-m3-cB_5ha6-a2-m5-cB
5 4jf3-a2-m5-cB 92 86 0.5054 0.5109 0.5465 3.81e-29 4jf3-a2-m4-cB_4jf3-a2-m5-cB
6 4jf3-a2-m4-cB 92 86 0.5054 0.5109 0.5465 3.81e-29 4jf3-a2-m4-cB_4jf3-a2-m5-cB
7 7s94-a2-m1-cF 83 71 0.3333 0.3735 0.4366 1.61e-17 7s94-a2-m1-cE_7s94-a2-m1-cF
8 7s94-a2-m1-cE 76 69 0.3333 0.4079 0.4493 6.33e-17 7s94-a2-m1-cE_7s94-a2-m1-cF
9 4jgs-a2-m1-cB 82 79 0.3333 0.3780 0.3924 2.86e-16 4jgs-a2-m1-cF_4jgs-a2-m1-cB
10 4jgs-a2-m1-cF 80 79 0.3333 0.3875 0.3924 2.87e-16 4jgs-a2-m1-cF_4jgs-a2-m1-cB
11 1mof-a1-m3-cA 53 53 0.2796 0.4906 0.4906 2.73e-11 1mof-a1-m2-cA_1mof-a1-m3-cA
12 1mof-a1-m2-cA 53 53 0.2796 0.4906 0.4906 2.73e-11 1mof-a1-m2-cA_1mof-a1-m3-cA
13 4g2k-a1-m1-cB 108 44 0.1828 0.1574 0.3864 0.002 4g2k-a1-m1-cC_4g2k-a1-m1-cB
14 4g2k-a1-m1-cC 107 44 0.1828 0.1589 0.3864 0.002 4g2k-a1-m1-cC_4g2k-a1-m1-cB
15 5h9c-a1-m3-cA 78 61 0.1935 0.2308 0.2951 0.007 5h9c-a1-m2-cA_5h9c-a1-m3-cA
16 5h9c-a1-m2-cA 78 61 0.1935 0.2308 0.2951 0.007 5h9c-a1-m2-cA_5h9c-a1-m3-cA
17 3s88-a5-m9-cJ 106 24 0.1290 0.1132 0.5000 0.056 3s88-a5-m5-cJ_3s88-a5-m9-cJ
18 3s88-a5-m5-cJ 106 24 0.1290 0.1132 0.5000 0.056 3s88-a5-m5-cJ_3s88-a5-m9-cJ
19 2e9f-a1-m1-cC 448 83 0.2796 0.0580 0.3133 0.092 2e9f-a1-m1-cC_2e9f-a1-m1-cD
20 2e9f-a1-m1-cA 449 83 0.2796 0.0579 0.3133 0.093 2e9f-a1-m1-cA_2e9f-a1-m1-cD
21 2e9f-a1-m1-cD 449 83 0.2796 0.0579 0.3133 0.093 2e9f-a1-m1-cA_2e9f-a1-m1-cD, 2e9f-a1-m1-cC_2e9f-a1-m1-cD, 2e9f-a1-m1-cD_2e9f-a1-m1-cB
22 2e9f-a1-m1-cB 450 83 0.2796 0.0578 0.3133 0.093 2e9f-a1-m1-cD_2e9f-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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