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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTSYYVNQSGIVT
EKVKEIRDRIQRRAEELRN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ha6-a2-m5-cB 79 79 1.0000 1.0000 1.0000 4.29e-52 5ha6-a2-m3-cB_5ha6-a2-m5-cB
2 5ha6-a2-m3-cB 79 79 1.0000 1.0000 1.0000 4.29e-52 5ha6-a2-m3-cB_5ha6-a2-m5-cB
3 5ha6-a1-m4-cA 93 93 1.0000 0.8495 0.8495 3.41e-48 5ha6-a1-m2-cA_5ha6-a1-m4-cA
4 5ha6-a1-m2-cA 93 93 1.0000 0.8495 0.8495 3.41e-48 5ha6-a1-m2-cA_5ha6-a1-m4-cA
5 4jf3-a2-m5-cB 92 86 0.4810 0.4130 0.4419 1.86e-17 4jf3-a2-m4-cB_4jf3-a2-m5-cB
6 4jf3-a2-m4-cB 92 86 0.4810 0.4130 0.4419 1.86e-17 4jf3-a2-m4-cB_4jf3-a2-m5-cB
7 7s94-a2-m1-cF 83 71 0.3038 0.2892 0.3380 1.57e-08 7s94-a2-m1-cE_7s94-a2-m1-cF
8 7s94-a2-m1-cE 76 69 0.3038 0.3158 0.3478 7.32e-08 7s94-a2-m1-cE_7s94-a2-m1-cF
9 4jgs-a2-m1-cF 80 79 0.3038 0.3000 0.3038 1.18e-07 4jgs-a2-m1-cF_4jgs-a2-m1-cB
10 4jgs-a2-m1-cB 82 79 0.3038 0.2927 0.3038 1.21e-07 4jgs-a2-m1-cF_4jgs-a2-m1-cB
11 1mof-a1-m3-cA 53 45 0.2405 0.3585 0.4222 9.12e-05 1mof-a1-m2-cA_1mof-a1-m3-cA
12 1mof-a1-m2-cA 53 45 0.2405 0.3585 0.4222 9.12e-05 1mof-a1-m2-cA_1mof-a1-m3-cA
13 7kip-a1-m1-cC 1192 58 0.2025 0.0134 0.2759 1.2 7kip-a1-m1-cB_7kip-a1-m1-cC
14 7kip-a1-m1-cB 1192 58 0.2025 0.0134 0.2759 1.2 7kip-a1-m1-cB_7kip-a1-m1-cC
15 7y9n-a1-m1-cA 212 73 0.3038 0.1132 0.3288 1.4 7y9n-a1-m1-cB_7y9n-a1-m1-cA
16 7cyd-a1-m1-cC 964 67 0.2278 0.0187 0.2687 3.7 7cyd-a1-m1-cB_7cyd-a1-m1-cC
17 7cyd-a1-m1-cB 964 67 0.2278 0.0187 0.2687 3.7 7cyd-a1-m1-cB_7cyd-a1-m1-cC
18 4d74-a1-m2-cA 151 63 0.1899 0.0993 0.2381 4.4 4d74-a1-m1-cA_4d74-a1-m2-cA
19 4d74-a1-m1-cA 151 63 0.1899 0.0993 0.2381 4.4 4d74-a1-m1-cA_4d74-a1-m2-cA
20 6pwk-a1-m1-cB 405 28 0.1266 0.0247 0.3571 4.8 6pwk-a1-m1-cB_6pwk-a1-m1-cA
21 1y1u-a2-m2-cC 544 68 0.2658 0.0386 0.3088 5.9 1y1u-a2-m1-cC_1y1u-a2-m2-cC
22 1y1u-a2-m1-cC 544 68 0.2658 0.0386 0.3088 5.9 1y1u-a2-m1-cC_1y1u-a2-m2-cC
23 7eyd-a1-m1-cTA 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cIA_7eyd-a1-m1-cTA
24 7eyd-a1-m1-cR6 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cE4_7eyd-a1-m1-cR6, 7eyd-a1-m1-cM6_7eyd-a1-m1-cR6
25 7eyd-a1-m1-cPA 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cIA_7eyd-a1-m1-cPA
26 7eyd-a1-m1-cM6 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cM6_7eyd-a1-m1-cR6
27 7eyd-a1-m1-cIA 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cIA_7eyd-a1-m1-cPA, 7eyd-a1-m1-cIA_7eyd-a1-m1-cTA
28 7eyd-a1-m1-cE4 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cE4_7eyd-a1-m1-cR6
29 7eyd-a1-m1-cC7 172 38 0.1646 0.0756 0.3421 7.3 7eyd-a1-m1-cC7_7eyd-a1-m1-cE7
30 7eyd-a1-m1-cE7 173 38 0.1646 0.0751 0.3421 7.5 7eyd-a1-m1-cC7_7eyd-a1-m1-cE7
31 5j7m-a1-m1-cB 119 21 0.1519 0.1008 0.5714 7.7 5j7m-a1-m1-cA_5j7m-a1-m1-cB
32 5j7m-a1-m1-cA 119 21 0.1519 0.1008 0.5714 7.7 5j7m-a1-m1-cA_5j7m-a1-m1-cB
33 5bv5-a7-m1-cA 315 73 0.1899 0.0476 0.2055 9.4 5bv5-a7-m1-cA_5bv5-a7-m3-cD

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Reference:
Jacob Schwartz et al.

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