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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
GSVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQIL
LQIDSLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xdj-a2-m1-cB 67 67 1.0000 1.0000 1.0000 1.02e-39 2xdj-a2-m1-cF_2xdj-a2-m1-cB
2 2xdj-a2-m1-cA 66 66 0.9851 1.0000 1.0000 3.89e-39 2xdj-a2-m1-cF_2xdj-a2-m1-cA
3 2xdj-a2-m1-cF 62 62 0.9254 1.0000 1.0000 5.86e-36 2xdj-a2-m1-cF_2xdj-a2-m1-cA, 2xdj-a2-m1-cF_2xdj-a2-m1-cB
4 8h13-a1-m1-cC 931 45 0.1493 0.0107 0.2222 0.75 8h13-a1-m1-cB_8h13-a1-m1-cC
5 8h13-a1-m1-cB 931 45 0.1493 0.0107 0.2222 0.75 8h13-a1-m1-cB_8h13-a1-m1-cC
6 8h15-a1-m1-cC 962 45 0.1493 0.0104 0.2222 0.80 8h15-a1-m1-cB_8h15-a1-m1-cC
7 8h15-a1-m1-cB 958 45 0.1493 0.0104 0.2222 0.84 8h15-a1-m1-cB_8h15-a1-m1-cC
8 6crv-a1-m1-cC 881 45 0.1493 0.0114 0.2222 0.98 6crv-a1-m1-cB_6crv-a1-m1-cC
9 6crv-a1-m1-cB 881 45 0.1493 0.0114 0.2222 0.98 6crv-a1-m1-cB_6crv-a1-m1-cC
10 5wrg-a1-m1-cC 736 45 0.1493 0.0136 0.2222 1.2 5wrg-a1-m1-cB_5wrg-a1-m1-cC
11 5wrg-a1-m1-cB 736 45 0.1493 0.0136 0.2222 1.2 5wrg-a1-m1-cB_5wrg-a1-m1-cC
12 6w0p-a2-m1-cC 719 33 0.1642 0.0153 0.3333 1.5 6w0p-a2-m1-cD_6w0p-a2-m1-cC
13 4ija-a1-m1-cA 363 63 0.2985 0.0551 0.3175 2.0 4ija-a1-m1-cB_4ija-a1-m1-cA
14 7xc6-a1-m1-cD 477 23 0.1343 0.0189 0.3913 2.5 7xc6-a1-m1-cA_7xc6-a1-m1-cD, 7xc6-a1-m1-cC_7xc6-a1-m1-cD
15 7xc6-a1-m1-cC 477 23 0.1343 0.0189 0.3913 2.5 7xc6-a1-m1-cC_7xc6-a1-m1-cD
16 7xc6-a1-m1-cA 477 23 0.1343 0.0189 0.3913 2.5 7xc6-a1-m1-cA_7xc6-a1-m1-cD
17 3s6j-a1-m1-cE 215 28 0.1791 0.0558 0.4286 6.7 3s6j-a1-m1-cA_3s6j-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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