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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
GSVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQVDKIGDESTTITVAPR
RDVKLDLRHWAFEPDKEDPVSSLGIRPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zpl-a4-m1-cC 88 88 1.0000 1.0000 1.0000 1.32e-58 2zpl-a4-m1-cC_2zpl-a4-m1-cB
2 2zpl-a4-m1-cB 93 93 1.0000 0.9462 0.9462 3.73e-56 2zpl-a4-m1-cA_2zpl-a4-m1-cB, 2zpl-a4-m1-cC_2zpl-a4-m1-cB
3 2zpl-a4-m1-cA 91 91 0.9773 0.9451 0.9451 1.33e-54 2zpl-a4-m1-cA_2zpl-a4-m1-cB
4 7xfs-a1-m1-cB 96 93 0.4205 0.3854 0.3978 9.23e-14 7xfs-a1-m1-cA_7xfs-a1-m1-cB
5 7xfs-a1-m1-cA 96 93 0.4205 0.3854 0.3978 9.23e-14 7xfs-a1-m1-cA_7xfs-a1-m1-cB
6 7xft-a1-m2-cA 86 41 0.1705 0.1744 0.3659 0.19 7xft-a1-m1-cA_7xft-a1-m2-cA
7 7xft-a1-m1-cA 86 41 0.1705 0.1744 0.3659 0.19 7xft-a1-m1-cA_7xft-a1-m2-cA
8 7xfu-a1-m1-cB 92 40 0.1591 0.1522 0.3500 1.6 7xfu-a1-m1-cA_7xfu-a1-m1-cB
9 7xfu-a1-m1-cA 92 40 0.1591 0.1522 0.3500 1.6 7xfu-a1-m1-cA_7xfu-a1-m1-cB
10 1l6o-a1-m1-cA 90 41 0.1705 0.1667 0.3659 2.4 1l6o-a1-m1-cB_1l6o-a1-m1-cA, 1l6o-a1-m1-cC_1l6o-a1-m1-cA
11 3fy5-a2-m2-cB 80 41 0.1705 0.1875 0.3659 2.7 3fy5-a2-m1-cB_3fy5-a2-m2-cB
12 3fy5-a2-m1-cB 80 41 0.1705 0.1875 0.3659 2.7 3fy5-a2-m1-cB_3fy5-a2-m2-cB
13 1l6o-a1-m1-cB 88 41 0.1705 0.1705 0.3659 2.8 1l6o-a1-m1-cB_1l6o-a1-m1-cA
14 2f0a-a5-m1-cA 87 41 0.1705 0.1724 0.3659 2.9 2f0a-a5-m1-cC_2f0a-a5-m1-cA
15 1l6o-a1-m1-cC 87 41 0.1705 0.1724 0.3659 2.9 1l6o-a1-m1-cC_1l6o-a1-m1-cA
16 2f0a-a5-m1-cC 80 38 0.1591 0.1750 0.3684 3.3 2f0a-a5-m1-cC_2f0a-a5-m1-cA

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Reference:
Jacob Schwartz et al.

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