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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=37)
GSVVIGQRCYRSPDCYSACKKLVGKATGKCTNGRCDC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6atl-a3-m1-cA 37 37 1.0000 1.0000 1.0000 4.95e-21 6atl-a3-m1-cC_6atl-a3-m1-cA
2 6atl-a3-m1-cC 36 36 0.9730 1.0000 1.0000 2.65e-20 6atl-a3-m1-cC_6atl-a3-m1-cA
3 4lmv-a2-m1-cD 252 22 0.3243 0.0476 0.5455 0.85 4lmv-a2-m1-cC_4lmv-a2-m1-cD
4 4lmv-a2-m1-cC 252 22 0.3243 0.0476 0.5455 0.85 4lmv-a2-m1-cC_4lmv-a2-m1-cD
5 1vc4-a4-m3-cB 254 23 0.2703 0.0394 0.4348 2.1 1vc4-a4-m1-cA_1vc4-a4-m3-cB
6 1vc4-a4-m1-cA 254 23 0.2703 0.0394 0.4348 2.1 1vc4-a4-m1-cA_1vc4-a4-m3-cB
7 1vc4-a3-m2-cA 254 23 0.2703 0.0394 0.4348 2.1 1vc4-a3-m1-cB_1vc4-a3-m2-cA
8 1vc4-a3-m1-cB 254 23 0.2703 0.0394 0.4348 2.1 1vc4-a3-m1-cB_1vc4-a3-m2-cA
9 6tni-a1-m1-ca 1067 30 0.2973 0.0103 0.3667 2.7 6tni-a1-m1-cA_6tni-a1-m1-ca
10 6tni-a1-m1-cA 1067 30 0.2973 0.0103 0.3667 2.7 6tni-a1-m1-cA_6tni-a1-m1-ca

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Reference:
Jacob Schwartz et al.

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