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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
GSVVKNVDMTEEMQIDAIDCANQALQKYNVEKDIAAHIKKEFDRKYDPTWHCVVGRNFGS
YVTHETKNFIYFYIGQVAILLFKSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wof-a2-m2-cB 85 85 1.0000 1.0000 1.0000 6.10e-61 5wof-a2-m1-cB_5wof-a2-m2-cB
2 5wof-a2-m1-cB 85 85 1.0000 1.0000 1.0000 6.10e-61 5wof-a2-m1-cB_5wof-a2-m2-cB
3 8glv-a1-m1-cAP 91 84 0.8118 0.7582 0.8214 1.91e-52 8glv-a1-m1-cAN_8glv-a1-m1-cAP
4 8glv-a1-m1-cAN 91 84 0.8118 0.7582 0.8214 1.91e-52 8glv-a1-m1-cAN_8glv-a1-m1-cAP
5 3zke-a3-m1-cK 85 84 0.8000 0.8000 0.8095 5.96e-52 3zke-a3-m1-cI_3zke-a3-m1-cK
6 3zke-a3-m1-cI 85 84 0.8000 0.8000 0.8095 5.96e-52 3zke-a3-m1-cI_3zke-a3-m1-cK
7 3rjs-a1-m2-cA 87 84 0.8118 0.7931 0.8214 3.02e-50 3rjs-a1-m1-cA_3rjs-a1-m2-cA
8 3rjs-a1-m1-cA 87 84 0.8118 0.7931 0.8214 3.02e-50 3rjs-a1-m1-cA_3rjs-a1-m2-cA
9 2v4j-a1-m1-cE 380 38 0.1882 0.0421 0.4211 0.005 2v4j-a1-m1-cB_2v4j-a1-m1-cE
10 2v4j-a1-m1-cB 380 38 0.1882 0.0421 0.4211 0.005 2v4j-a1-m1-cB_2v4j-a1-m1-cE
11 3udc-a1-m1-cG 267 44 0.1765 0.0562 0.3409 0.042 3udc-a1-m1-cB_3udc-a1-m1-cG
12 3udc-a1-m1-cB 267 44 0.1765 0.0562 0.3409 0.042 3udc-a1-m1-cB_3udc-a1-m1-cG
13 5fx0-a1-m2-cA 98 86 0.2588 0.2245 0.2558 0.19 5fx0-a1-m1-cA_5fx0-a1-m2-cA
14 5fx0-a1-m1-cA 98 86 0.2588 0.2245 0.2558 0.19 5fx0-a1-m1-cA_5fx0-a1-m2-cA
15 6e20-a1-m1-cA 130 53 0.2000 0.1308 0.3208 1.6 6e20-a1-m1-cA_6e20-a1-m1-cB
16 6e20-a1-m1-cB 131 53 0.2000 0.1298 0.3208 1.7 6e20-a1-m1-cA_6e20-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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