Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=78)
GTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVV
AREPTTGAQLAGMFENLR

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3bue-a1-m1-cF 78 78 1.0000 1.0000 1.0000 6.57e-51 3bue-a1-m1-cA_3bue-a1-m1-cF
2 3bue-a1-m1-cA 78 78 1.0000 1.0000 1.0000 6.57e-51 3bue-a1-m1-cA_3bue-a1-m1-cF
3 3cag-a2-m1-cC 79 78 1.0000 0.9873 1.0000 8.61e-51 3cag-a2-m1-cB_3cag-a2-m1-cC
4 3cag-a2-m1-cB 79 78 1.0000 0.9873 1.0000 8.61e-51 3cag-a2-m1-cB_3cag-a2-m1-cC
5 3lap-a1-m1-cB 149 78 1.0000 0.5235 1.0000 1.11e-50 3lap-a1-m1-cB_3lap-a1-m1-cF
6 3lap-a1-m1-cA 149 78 1.0000 0.5235 1.0000 1.11e-50 3lap-a1-m1-cA_3lap-a1-m1-cF
7 3ere-a1-m2-cD 156 78 1.0000 0.5000 1.0000 1.87e-50 3ere-a1-m1-cD_3ere-a1-m2-cD
8 3ere-a1-m1-cD 156 78 1.0000 0.5000 1.0000 1.87e-50 3ere-a1-m1-cD_3ere-a1-m2-cD
9 3fhz-a1-m1-cF 155 78 1.0000 0.5032 1.0000 1.96e-50 3fhz-a1-m1-cF_3fhz-a1-m1-cB
10 3fhz-a1-m1-cE 155 78 1.0000 0.5032 1.0000 1.96e-50 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cD
11 3fhz-a1-m1-cA 155 78 1.0000 0.5032 1.0000 1.96e-50 3fhz-a1-m1-cA_3fhz-a1-m1-cB
12 3lap-a1-m1-cF 154 78 1.0000 0.5065 1.0000 2.08e-50 3lap-a1-m1-cA_3lap-a1-m1-cF, 3lap-a1-m1-cB_3lap-a1-m1-cF, 3lap-a1-m1-cE_3lap-a1-m1-cF
13 3lap-a1-m1-cE 154 78 1.0000 0.5065 1.0000 2.08e-50 3lap-a1-m1-cE_3lap-a1-m1-cF
14 3fhz-a1-m1-cB 161 78 1.0000 0.4845 1.0000 2.49e-50 3fhz-a1-m1-cA_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cF_3fhz-a1-m1-cB
15 3fhz-a1-m1-cD 166 78 1.0000 0.4699 1.0000 2.72e-50 3fhz-a1-m1-cE_3fhz-a1-m1-cD
16 5cj9-a1-m3-cA 146 74 0.3462 0.1849 0.3649 3.38e-12 5cj9-a1-m2-cA_5cj9-a1-m3-cA
17 5cj9-a1-m2-cA 146 74 0.3462 0.1849 0.3649 3.38e-12 5cj9-a1-m2-cA_5cj9-a1-m3-cA
18 3v4g-a1-m6-cA 145 63 0.2949 0.1586 0.3651 2.23e-05 3v4g-a1-m2-cA_3v4g-a1-m6-cA, 3v4g-a1-m5-cA_3v4g-a1-m6-cA
19 3v4g-a1-m5-cA 145 63 0.2949 0.1586 0.3651 2.23e-05 3v4g-a1-m5-cA_3v4g-a1-m6-cA
20 3v4g-a1-m2-cA 145 63 0.2949 0.1586 0.3651 2.23e-05 3v4g-a1-m2-cA_3v4g-a1-m6-cA
21 1xxb-a1-m1-cF 71 68 0.2949 0.3239 0.3382 5.93e-05 1xxb-a1-m1-cE_1xxb-a1-m1-cF
22 1xxb-a1-m1-cE 71 68 0.2949 0.3239 0.3382 5.93e-05 1xxb-a1-m1-cE_1xxb-a1-m1-cF
23 1xxb-a1-m1-cD 71 68 0.2949 0.3239 0.3382 5.93e-05 1xxb-a1-m1-cA_1xxb-a1-m1-cD
24 1xxb-a1-m1-cA 71 68 0.2949 0.3239 0.3382 5.93e-05 1xxb-a1-m1-cA_1xxb-a1-m1-cD
25 4bwi-a1-m1-cB 377 20 0.1282 0.0265 0.5000 2.5 4bwi-a1-m1-cB_4bwi-a1-m1-cA
26 4u7n-a1-m1-cB 212 65 0.2564 0.0943 0.3077 2.5 4u7n-a1-m1-cA_4u7n-a1-m1-cB
27 4bwi-a1-m1-cA 381 20 0.1282 0.0262 0.5000 2.5 4bwi-a1-m1-cB_4bwi-a1-m1-cA
28 4u7n-a1-m1-cA 211 65 0.2564 0.0948 0.3077 2.6 4u7n-a1-m1-cA_4u7n-a1-m1-cB
29 2pff-a1-m2-cH 2006 58 0.2436 0.0095 0.3276 3.7 2pff-a1-m2-cE_2pff-a1-m2-cH
30 2pff-a1-m2-cE 2006 58 0.2436 0.0095 0.3276 3.7 2pff-a1-m2-cE_2pff-a1-m2-cH
31 4nq3-a1-m2-cB 334 78 0.3462 0.0808 0.3462 5.6 4nq3-a1-m1-cB_4nq3-a1-m2-cB, 4nq3-a1-m2-cB_4nq3-a1-m1-cA, 4nq3-a1-m2-cB_4nq3-a1-m2-cA
32 4nq3-a1-m1-cB 334 78 0.3462 0.0808 0.3462 5.6 4nq3-a1-m1-cB_4nq3-a1-m2-cB
33 4nq3-a1-m2-cA 337 78 0.3462 0.0801 0.3462 6.0 4nq3-a1-m2-cB_4nq3-a1-m2-cA
34 4nq3-a1-m1-cA 337 78 0.3462 0.0801 0.3462 6.0 4nq3-a1-m2-cB_4nq3-a1-m1-cA
35 1dqu-a1-m4-cA 513 57 0.2051 0.0312 0.2807 7.3 1dqu-a1-m1-cA_1dqu-a1-m4-cA, 1dqu-a1-m2-cA_1dqu-a1-m4-cA, 1dqu-a1-m3-cA_1dqu-a1-m4-cA
36 1dqu-a1-m3-cA 513 57 0.2051 0.0312 0.2807 7.3 1dqu-a1-m3-cA_1dqu-a1-m4-cA
37 1dqu-a1-m2-cA 513 57 0.2051 0.0312 0.2807 7.3 1dqu-a1-m2-cA_1dqu-a1-m4-cA
38 1dqu-a1-m1-cA 513 57 0.2051 0.0312 0.2807 7.3 1dqu-a1-m1-cA_1dqu-a1-m4-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600