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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GTIITVTAQANEKNTRTVSTAKGDKKIISVPLFEKEKGSNVKVAYGSAFLPDFIQLGDTV
TVSGRVQAKESGEYVNYNFVFPTVEKVFI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wkc-a1-m1-cC 90 89 1.0000 0.9889 1.0000 5.93e-60 2wkc-a1-m1-cA_2wkc-a1-m1-cC, 2wkc-a1-m1-cB_2wkc-a1-m1-cC
2 2wkc-a1-m1-cA 90 89 1.0000 0.9889 1.0000 5.93e-60 2wkc-a1-m1-cA_2wkc-a1-m1-cC, 2wkc-a1-m1-cB_2wkc-a1-m1-cA
3 2wkc-a1-m1-cB 89 89 1.0000 1.0000 1.0000 7.66e-60 2wkc-a1-m1-cB_2wkc-a1-m1-cA, 2wkc-a1-m1-cB_2wkc-a1-m1-cC
4 2wkd-a1-m2-cA 77 89 0.8652 1.0000 0.8652 5.78e-42 2wkd-a1-m1-cA_2wkd-a1-m2-cA
5 2wkd-a1-m1-cA 77 89 0.8652 1.0000 0.8652 5.78e-42 2wkd-a1-m1-cA_2wkd-a1-m2-cA
6 5nh0-a1-m2-cC 299 44 0.1798 0.0535 0.3636 0.65 5nh0-a1-m1-cC_5nh0-a1-m2-cC, 5nh0-a1-m2-cA_5nh0-a1-m2-cC
7 5nh0-a1-m2-cA 299 44 0.1798 0.0535 0.3636 0.65 5nh0-a1-m2-cA_5nh0-a1-m2-cB, 5nh0-a1-m2-cA_5nh0-a1-m2-cC
8 5nh0-a1-m1-cC 299 44 0.1798 0.0535 0.3636 0.65 5nh0-a1-m1-cC_5nh0-a1-m2-cC
9 5nh0-a1-m1-cA 299 44 0.1798 0.0535 0.3636 0.65 5nh0-a1-m1-cA_5nh0-a1-m2-cB
10 7e6m-a1-m1-cB 299 44 0.1798 0.0535 0.3636 0.69 7e6m-a1-m1-cA_7e6m-a1-m1-cB
11 7e6m-a1-m1-cA 299 44 0.1798 0.0535 0.3636 0.69 7e6m-a1-m1-cA_7e6m-a1-m1-cB
12 5nh0-a1-m2-cB 300 44 0.1798 0.0533 0.3636 0.69 5nh0-a1-m1-cA_5nh0-a1-m2-cB, 5nh0-a1-m2-cA_5nh0-a1-m2-cB
13 3l6i-a3-m2-cB 165 36 0.1461 0.0788 0.3611 3.8 3l6i-a3-m1-cA_3l6i-a3-m2-cB
14 3l6i-a3-m1-cA 164 36 0.1461 0.0793 0.3611 4.0 3l6i-a3-m1-cA_3l6i-a3-m2-cB
15 2xhz-a3-m1-cC 173 37 0.1573 0.0809 0.3784 7.1 2xhz-a3-m1-cC_2xhz-a3-m1-cD
16 2xhz-a1-m1-cA 173 37 0.1573 0.0809 0.3784 7.1 2xhz-a1-m1-cA_2xhz-a1-m1-cD
17 2xhz-a3-m1-cD 173 37 0.1573 0.0809 0.3784 7.2 2xhz-a3-m1-cC_2xhz-a3-m1-cD
18 2xhz-a1-m1-cD 173 37 0.1573 0.0809 0.3784 7.2 2xhz-a1-m1-cA_2xhz-a1-m1-cD, 2xhz-a1-m1-cD_2xhz-a1-m1-cB
19 6to4-a1-m1-cA 291 24 0.1348 0.0412 0.5000 7.5 6to4-a1-m1-cD_6to4-a1-m1-cA
20 2xhz-a1-m1-cB 174 37 0.1573 0.0805 0.3784 7.6 2xhz-a1-m1-cD_2xhz-a1-m1-cB
21 3w9j-a2-m1-cE 1030 33 0.1461 0.0126 0.3939 9.3 3w9j-a2-m1-cD_3w9j-a2-m1-cE
22 3w9j-a2-m1-cD 1019 33 0.1461 0.0128 0.3939 9.5 3w9j-a2-m1-cD_3w9j-a2-m1-cE

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Reference:
Jacob Schwartz et al.

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