Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
GTIITVTAQANEKNTRTVSTAKGDKKIISVPLFEKEVKVAYGSAFPDFIQGDTVTVSGRV
QAKNYNFVFPTVEKVFI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wkd-a1-m2-cA 77 77 1.0000 1.0000 1.0000 1.85e-50 2wkd-a1-m1-cA_2wkd-a1-m2-cA
2 2wkd-a1-m1-cA 77 77 1.0000 1.0000 1.0000 1.85e-50 2wkd-a1-m1-cA_2wkd-a1-m2-cA
3 2wkc-a1-m1-cB 89 89 1.0000 0.8652 0.8652 5.00e-42 2wkc-a1-m1-cB_2wkc-a1-m1-cA, 2wkc-a1-m1-cB_2wkc-a1-m1-cC
4 2wkc-a1-m1-cC 90 89 1.0000 0.8556 0.8652 5.38e-42 2wkc-a1-m1-cA_2wkc-a1-m1-cC, 2wkc-a1-m1-cB_2wkc-a1-m1-cC
5 2wkc-a1-m1-cA 90 89 1.0000 0.8556 0.8652 5.38e-42 2wkc-a1-m1-cA_2wkc-a1-m1-cC, 2wkc-a1-m1-cB_2wkc-a1-m1-cA
6 2xot-a1-m1-cA 331 53 0.2208 0.0514 0.3208 1.4 2xot-a1-m1-cA_2xot-a1-m1-cB
7 2xot-a1-m1-cB 333 53 0.2208 0.0511 0.3208 1.4 2xot-a1-m1-cA_2xot-a1-m1-cB
8 6k31-a1-m1-cB 1092 40 0.1818 0.0128 0.3500 1.7 6k31-a1-m1-cB_6k31-a1-m1-cA
9 7d8j-a1-m2-cB 98 55 0.2208 0.1735 0.3091 2.2 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
10 4nmd-a1-m1-cA 979 48 0.1948 0.0153 0.3125 4.1 4nmd-a1-m1-cA_4nmd-a1-m1-cB
11 4nmd-a1-m1-cB 980 48 0.1948 0.0153 0.3125 4.2 4nmd-a1-m1-cA_4nmd-a1-m1-cB
12 2f2h-a1-m1-cF 773 25 0.1429 0.0142 0.4400 4.8 2f2h-a1-m1-cB_2f2h-a1-m1-cF, 2f2h-a1-m1-cE_2f2h-a1-m1-cF
13 2f2h-a1-m1-cE 773 25 0.1429 0.0142 0.4400 4.8 2f2h-a1-m1-cE_2f2h-a1-m1-cF
14 2f2h-a1-m1-cB 773 25 0.1429 0.0142 0.4400 4.8 2f2h-a1-m1-cB_2f2h-a1-m1-cF
15 6qa0-a1-m1-cB 140 22 0.1169 0.0643 0.4091 5.5 6qa0-a1-m1-cA_6qa0-a1-m1-cB
16 6qa0-a1-m1-cA 140 22 0.1169 0.0643 0.4091 5.5 6qa0-a1-m1-cA_6qa0-a1-m1-cB
17 3dd4-a2-m2-cA 214 32 0.1558 0.0561 0.3750 9.5 3dd4-a2-m1-cA_3dd4-a2-m2-cA
18 3dd4-a2-m1-cA 214 32 0.1558 0.0561 0.3750 9.5 3dd4-a2-m1-cA_3dd4-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600