Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=59)
GTKQEKTILNMARFIRSQALTILEKANELDADEIADIAESIHDHADEIYRSALARFGDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1f4n-a2-m2-cA 59 59 1.0000 1.0000 1.0000 2.17e-37 1f4n-a2-m2-cB_1f4n-a2-m2-cA
2 1f4n-a2-m2-cB 50 50 0.8475 1.0000 1.0000 1.26e-29 1f4n-a2-m1-cB_1f4n-a2-m2-cB, 1f4n-a2-m2-cB_1f4n-a2-m2-cA
3 1f4n-a2-m1-cB 50 50 0.8475 1.0000 1.0000 1.26e-29 1f4n-a2-m1-cB_1f4n-a2-m2-cB
4 1b6q-a1-m2-cA 56 55 0.7627 0.8036 0.8182 2.82e-28 1b6q-a1-m1-cA_1b6q-a1-m2-cA
5 1b6q-a1-m1-cA 56 55 0.7627 0.8036 0.8182 2.82e-28 1b6q-a1-m1-cA_1b6q-a1-m2-cA
6 1gmg-a2-m3-cB 54 54 0.7458 0.8148 0.8148 1.86e-27 1gmg-a2-m1-cB_1gmg-a2-m3-cB
7 1gmg-a2-m1-cB 54 54 0.7458 0.8148 0.8148 1.86e-27 1gmg-a2-m1-cB_1gmg-a2-m3-cB
8 1nkd-a1-m2-cA 59 58 0.7797 0.7797 0.7931 1.19e-26 1nkd-a1-m1-cA_1nkd-a1-m2-cA
9 1nkd-a1-m1-cA 59 58 0.7797 0.7797 0.7931 1.19e-26 1nkd-a1-m1-cA_1nkd-a1-m2-cA
10 1qx8-a1-m2-cB 51 55 0.7119 0.8235 0.7636 5.61e-24 1qx8-a1-m1-cA_1qx8-a1-m2-cB, 1qx8-a1-m1-cB_1qx8-a1-m2-cB
11 1qx8-a1-m1-cB 51 55 0.7119 0.8235 0.7636 5.61e-24 1qx8-a1-m1-cB_1qx8-a1-m2-cB
12 1qx8-a1-m1-cA 47 52 0.6610 0.8298 0.7500 1.75e-21 1qx8-a1-m1-cA_1qx8-a1-m2-cB
13 1ur3-a1-m3-cM 290 38 0.2034 0.0414 0.3158 3.8 1ur3-a1-m2-cM_1ur3-a1-m3-cM
14 1ur3-a1-m2-cM 290 38 0.2034 0.0414 0.3158 3.8 1ur3-a1-m2-cM_1ur3-a1-m3-cM
15 6d6s-a1-m1-cB 432 45 0.2712 0.0370 0.3556 4.4 6d6s-a1-m1-cA_6d6s-a1-m1-cB
16 6d6s-a1-m1-cA 432 45 0.2712 0.0370 0.3556 4.4 6d6s-a1-m1-cA_6d6s-a1-m1-cB
17 5owj-a1-m1-cB 432 45 0.2712 0.0370 0.3556 4.4 5owj-a1-m1-cA_5owj-a1-m1-cB
18 5owj-a1-m1-cA 432 45 0.2712 0.0370 0.3556 4.4 5owj-a1-m1-cA_5owj-a1-m1-cB
19 5owi-a1-m1-cB 432 45 0.2712 0.0370 0.3556 4.4 5owi-a1-m1-cA_5owi-a1-m1-cB
20 5owi-a1-m1-cA 432 45 0.2712 0.0370 0.3556 4.4 5owi-a1-m1-cA_5owi-a1-m1-cB
21 4kp4-a1-m1-cA 219 33 0.2203 0.0594 0.3939 8.0 4kp4-a1-m1-cB_4kp4-a1-m1-cA
22 4kp4-a1-m1-cB 217 33 0.2203 0.0599 0.3939 8.1 4kp4-a1-m1-cB_4kp4-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600