Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
GTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAV
KYLQSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nr4-a5-m3-cE 69 66 1.0000 0.9565 1.0000 1.64e-45 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
2 1nr4-a5-m4-cG 66 66 1.0000 1.0000 1.0000 1.78e-45 1nr4-a5-m4-cG_1nr4-a5-m3-cE
3 1nr4-a5-m1-cA 67 66 1.0000 0.9851 1.0000 2.06e-45 1nr4-a5-m1-cA_1nr4-a5-m3-cE
4 1nr4-a5-m3-cF 66 63 0.9545 0.9545 1.0000 4.62e-43 1nr4-a5-m3-cF_1nr4-a5-m3-cE
5 2q8r-a2-m1-cG 63 61 0.3182 0.3333 0.3443 1.34e-11 2q8r-a2-m1-cF_2q8r-a2-m1-cG
6 2q8r-a2-m1-cF 63 61 0.3182 0.3333 0.3443 1.34e-11 2q8r-a2-m1-cF_2q8r-a2-m1-cG
7 5yam-a1-m1-cB 69 57 0.3333 0.3188 0.3860 6.83e-11 5yam-a1-m1-cA_5yam-a1-m1-cB
8 5yam-a1-m1-cA 69 57 0.3333 0.3188 0.3860 6.83e-11 5yam-a1-m1-cA_5yam-a1-m1-cB
9 2ra4-a4-m4-cB 65 61 0.3485 0.3538 0.3770 1.10e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
10 2ra4-a4-m2-cB 65 61 0.3485 0.3538 0.3770 1.10e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
11 2ra4-a2-m4-cB 65 61 0.3485 0.3538 0.3770 1.10e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
12 2ra4-a2-m4-cA 65 61 0.3485 0.3538 0.3770 1.10e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
13 2fj2-a2-m1-cD 67 57 0.3333 0.3284 0.3860 1.22e-10 2fj2-a2-m1-cD_2fj2-a2-m1-cC
14 2fj2-a2-m1-cC 68 57 0.3333 0.3235 0.3860 1.24e-10 2fj2-a2-m1-cD_2fj2-a2-m1-cC
15 1ncv-a1-m1-cB 76 64 0.3333 0.2895 0.3438 1.14e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
16 1ncv-a1-m1-cA 76 64 0.3333 0.2895 0.3438 1.14e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
17 5ltl-a1-m1-cB 68 59 0.3182 0.3088 0.3559 3.37e-09 5ltl-a1-m1-cA_5ltl-a1-m1-cB
18 5ltl-a1-m1-cA 67 60 0.3182 0.3134 0.3500 3.45e-09 5ltl-a1-m1-cA_5ltl-a1-m1-cB
19 2vxw-a1-m1-cD 62 57 0.3030 0.3226 0.3509 3.87e-09 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
20 2vxw-a1-m1-cB 69 57 0.3030 0.2899 0.3509 4.11e-09 2vxw-a1-m1-cD_2vxw-a1-m1-cB
21 2vxw-a1-m1-cA 69 57 0.3030 0.2899 0.3509 4.11e-09 2vxw-a1-m1-cD_2vxw-a1-m1-cA
22 5l2u-a2-m2-cI 65 57 0.3030 0.3077 0.3509 4.37e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cI
23 5dnf-a1-m1-cG 65 57 0.3030 0.3077 0.3509 4.37e-09 5dnf-a1-m1-cE_5dnf-a1-m1-cG
24 5dnf-a1-m1-cE 65 57 0.3030 0.3077 0.3509 4.37e-09 5dnf-a1-m1-cE_5dnf-a1-m1-cG
25 5dnf-a1-m1-cD 65 57 0.3030 0.3077 0.3509 4.37e-09 5dnf-a1-m1-cA_5dnf-a1-m1-cD
26 5dnf-a1-m1-cA 65 57 0.3030 0.3077 0.3509 4.37e-09 5dnf-a1-m1-cA_5dnf-a1-m1-cD
27 1hrj-a1-m1-cB 68 57 0.3030 0.2941 0.3509 4.53e-09 1hrj-a1-m1-cA_1hrj-a1-m1-cB
28 1hrj-a1-m1-cA 68 57 0.3030 0.2941 0.3509 4.53e-09 1hrj-a1-m1-cA_1hrj-a1-m1-cB
29 5l2u-a2-m2-cH 64 57 0.3030 0.3125 0.3509 4.62e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cH
30 5l2u-a2-m2-cG 64 57 0.3030 0.3125 0.3509 4.62e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
31 2l9h-a1-m1-cC 67 57 0.3030 0.2985 0.3509 4.68e-09 2l9h-a1-m1-cA_2l9h-a1-m1-cC
32 2l9h-a1-m1-cA 67 57 0.3030 0.2985 0.3509 4.68e-09 2l9h-a1-m1-cA_2l9h-a1-m1-cC
33 6aez-a1-m3-cA 64 59 0.3333 0.3438 0.3729 5.94e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
34 6aez-a1-m2-cA 64 59 0.3333 0.3438 0.3729 5.94e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
35 4mhe-a2-m1-cB 69 66 0.3788 0.3623 0.3788 1.28e-08 4mhe-a2-m1-cC_4mhe-a2-m1-cB
36 4mhe-a2-m1-cC 61 57 0.3030 0.3279 0.3509 1.93e-08 4mhe-a2-m1-cC_4mhe-a2-m1-cB
37 7s5a-a1-m1-cA 73 60 0.2576 0.2329 0.2833 2.12e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
38 7s5a-a1-m1-cB 76 60 0.2576 0.2237 0.2833 2.24e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
39 1esr-a1-m2-cA 75 60 0.2576 0.2267 0.2833 2.36e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
40 1esr-a1-m1-cA 75 60 0.2576 0.2267 0.2833 2.36e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
41 6log-a1-m2-cA 63 57 0.2879 0.3016 0.3333 1.89e-07 6log-a1-m1-cA_6log-a1-m2-cA
42 6log-a1-m1-cA 63 57 0.2879 0.3016 0.3333 1.89e-07 6log-a1-m1-cA_6log-a1-m2-cA
43 1f2l-a1-m1-cC 64 47 0.2576 0.2656 0.3617 2.12e-05 1f2l-a1-m1-cC_1f2l-a1-m1-cD
44 1f2l-a1-m1-cA 64 47 0.2576 0.2656 0.3617 2.12e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD
45 1f2l-a1-m1-cD 70 47 0.2576 0.2429 0.3617 2.37e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
46 4oij-a1-m1-cB 71 42 0.1970 0.1831 0.3095 0.002 4oij-a1-m1-cA_4oij-a1-m1-cB
47 4oij-a1-m1-cA 71 42 0.1970 0.1831 0.3095 0.002 4oij-a1-m1-cA_4oij-a1-m1-cB
48 2jp1-a1-m1-cB 60 55 0.2424 0.2667 0.2909 0.003 2jp1-a1-m1-cA_2jp1-a1-m1-cB
49 2jp1-a1-m1-cA 60 55 0.2424 0.2667 0.2909 0.003 2jp1-a1-m1-cA_2jp1-a1-m1-cB
50 5eki-a7-m1-cA 72 62 0.2576 0.2361 0.2742 0.019 5eki-a7-m1-cF_5eki-a7-m1-cA
51 5eki-a7-m1-cF 70 61 0.2576 0.2429 0.2787 0.023 5eki-a7-m1-cF_5eki-a7-m1-cA
52 2n54-a1-m1-cB 66 55 0.2121 0.2121 0.2545 0.032 2n54-a1-m1-cA_2n54-a1-m1-cB
53 2n54-a1-m1-cA 66 55 0.2121 0.2121 0.2545 0.032 2n54-a1-m1-cA_2n54-a1-m1-cB
54 2hci-a1-m1-cB 65 59 0.2424 0.2462 0.2712 0.23 2hci-a1-m1-cB_2hci-a1-m1-cA
55 2hci-a1-m1-cA 68 59 0.2424 0.2353 0.2712 0.25 2hci-a1-m1-cB_2hci-a1-m1-cA
56 4wj1-a2-m2-cA 278 41 0.1667 0.0396 0.2683 1.4 4wj1-a2-m1-cA_4wj1-a2-m2-cA
57 4wj1-a2-m1-cA 278 41 0.1667 0.0396 0.2683 1.4 4wj1-a2-m1-cA_4wj1-a2-m2-cA
58 1tvx-a1-m1-cD 71 30 0.1515 0.1408 0.3333 1.7 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
59 1tvx-a1-m1-cB 71 30 0.1515 0.1408 0.3333 1.7 1tvx-a1-m1-cB_1tvx-a1-m1-cD
60 1tvx-a1-m1-cC 64 30 0.1515 0.1562 0.3333 1.9 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
61 1tvx-a1-m1-cA 64 30 0.1515 0.1562 0.3333 1.9 1tvx-a1-m1-cA_1tvx-a1-m1-cC
62 3tlf-a1-m1-cC 252 31 0.1667 0.0437 0.3548 8.1 3tlf-a1-m1-cC_3tlf-a1-m1-cF
63 3tlf-a1-m1-cB 252 31 0.1667 0.0437 0.3548 8.1 3tlf-a1-m1-cB_3tlf-a1-m1-cF
64 3tlf-a3-m1-cF 253 31 0.1667 0.0435 0.3548 8.1 3tlf-a3-m1-cF_3tlf-a3-m1-cE
65 3tlf-a1-m1-cF 253 31 0.1667 0.0435 0.3548 8.1 3tlf-a1-m1-cB_3tlf-a1-m1-cF, 3tlf-a1-m1-cC_3tlf-a1-m1-cF
66 3tlf-a3-m1-cE 254 31 0.1667 0.0433 0.3548 8.1 3tlf-a3-m1-cF_3tlf-a3-m1-cE
67 2mgs-a1-m1-cB 71 57 0.2121 0.1972 0.2456 8.4 2mgs-a1-m1-cA_2mgs-a1-m1-cB
68 2mgs-a1-m1-cA 71 57 0.2121 0.1972 0.2456 8.4 2mgs-a1-m1-cA_2mgs-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600