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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
GTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAV
KYLQSLERS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nr4-a5-m3-cE 69 69 1.0000 1.0000 1.0000 9.55e-48 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
2 1nr4-a5-m1-cA 67 66 0.9565 0.9851 1.0000 1.63e-45 1nr4-a5-m1-cA_1nr4-a5-m3-cE
3 1nr4-a5-m4-cG 66 66 0.9565 1.0000 1.0000 1.71e-45 1nr4-a5-m4-cG_1nr4-a5-m3-cE
4 1nr4-a5-m3-cF 66 66 0.9565 1.0000 1.0000 3.42e-45 1nr4-a5-m3-cF_1nr4-a5-m3-cE
5 2q8r-a2-m1-cG 63 61 0.3043 0.3333 0.3443 1.44e-11 2q8r-a2-m1-cF_2q8r-a2-m1-cG
6 2q8r-a2-m1-cF 63 61 0.3043 0.3333 0.3443 1.44e-11 2q8r-a2-m1-cF_2q8r-a2-m1-cG
7 5yam-a1-m1-cB 69 57 0.3188 0.3188 0.3860 7.74e-11 5yam-a1-m1-cA_5yam-a1-m1-cB
8 5yam-a1-m1-cA 69 57 0.3188 0.3188 0.3860 7.74e-11 5yam-a1-m1-cA_5yam-a1-m1-cB
9 2fj2-a2-m1-cC 68 62 0.3333 0.3382 0.3710 1.12e-10 2fj2-a2-m1-cD_2fj2-a2-m1-cC
10 2fj2-a2-m1-cD 67 62 0.3333 0.3433 0.3710 1.16e-10 2fj2-a2-m1-cD_2fj2-a2-m1-cC
11 2ra4-a4-m4-cB 65 61 0.3333 0.3538 0.3770 1.18e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
12 2ra4-a4-m2-cB 65 61 0.3333 0.3538 0.3770 1.18e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
13 2ra4-a2-m4-cB 65 61 0.3333 0.3538 0.3770 1.18e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
14 2ra4-a2-m4-cA 65 61 0.3333 0.3538 0.3770 1.18e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
15 2vxw-a1-m1-cD 62 62 0.3478 0.3871 0.3871 3.39e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
16 5l2u-a2-m2-cH 64 62 0.3478 0.3750 0.3871 4.05e-10 5l2u-a2-m2-cG_5l2u-a2-m2-cH
17 5l2u-a2-m2-cG 64 62 0.3478 0.3750 0.3871 4.05e-10 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
18 5l2u-a2-m2-cI 65 62 0.3478 0.3692 0.3871 4.14e-10 5l2u-a2-m2-cG_5l2u-a2-m2-cI
19 5dnf-a1-m1-cG 65 62 0.3478 0.3692 0.3871 4.14e-10 5dnf-a1-m1-cE_5dnf-a1-m1-cG
20 5dnf-a1-m1-cE 65 62 0.3478 0.3692 0.3871 4.14e-10 5dnf-a1-m1-cE_5dnf-a1-m1-cG
21 5dnf-a1-m1-cD 65 62 0.3478 0.3692 0.3871 4.14e-10 5dnf-a1-m1-cA_5dnf-a1-m1-cD
22 5dnf-a1-m1-cA 65 62 0.3478 0.3692 0.3871 4.14e-10 5dnf-a1-m1-cA_5dnf-a1-m1-cD
23 2vxw-a1-m1-cB 69 62 0.3478 0.3478 0.3871 4.26e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cB
24 2vxw-a1-m1-cA 69 62 0.3478 0.3478 0.3871 4.26e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cA
25 2l9h-a1-m1-cC 67 62 0.3478 0.3582 0.3871 4.48e-10 2l9h-a1-m1-cA_2l9h-a1-m1-cC
26 2l9h-a1-m1-cA 67 62 0.3478 0.3582 0.3871 4.48e-10 2l9h-a1-m1-cA_2l9h-a1-m1-cC
27 1hrj-a1-m1-cB 68 62 0.3478 0.3529 0.3871 4.54e-10 1hrj-a1-m1-cA_1hrj-a1-m1-cB
28 1hrj-a1-m1-cA 68 62 0.3478 0.3529 0.3871 4.54e-10 1hrj-a1-m1-cA_1hrj-a1-m1-cB
29 1ncv-a1-m1-cB 76 64 0.3188 0.2895 0.3438 1.31e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
30 1ncv-a1-m1-cA 76 64 0.3188 0.2895 0.3438 1.31e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
31 6aez-a1-m3-cA 64 62 0.3333 0.3594 0.3710 2.71e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
32 6aez-a1-m2-cA 64 62 0.3333 0.3594 0.3710 2.71e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
33 5ltl-a1-m1-cB 68 59 0.3043 0.3088 0.3559 3.61e-09 5ltl-a1-m1-cA_5ltl-a1-m1-cB
34 5ltl-a1-m1-cA 67 60 0.3043 0.3134 0.3500 3.65e-09 5ltl-a1-m1-cA_5ltl-a1-m1-cB
35 4mhe-a2-m1-cB 69 67 0.3623 0.3623 0.3731 9.35e-09 4mhe-a2-m1-cC_4mhe-a2-m1-cB
36 6log-a1-m2-cA 63 62 0.3333 0.3651 0.3710 1.66e-08 6log-a1-m1-cA_6log-a1-m2-cA
37 6log-a1-m1-cA 63 62 0.3333 0.3651 0.3710 1.66e-08 6log-a1-m1-cA_6log-a1-m2-cA
38 4mhe-a2-m1-cC 61 60 0.3188 0.3607 0.3667 1.83e-08 4mhe-a2-m1-cC_4mhe-a2-m1-cB
39 7s5a-a1-m1-cA 73 60 0.2464 0.2329 0.2833 2.58e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
40 1esr-a1-m2-cA 75 60 0.2464 0.2267 0.2833 3.01e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
41 1esr-a1-m1-cA 75 60 0.2464 0.2267 0.2833 3.01e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
42 7s5a-a1-m1-cB 76 60 0.2464 0.2237 0.2833 3.08e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
43 1f2l-a1-m1-cC 64 47 0.2464 0.2656 0.3617 2.21e-05 1f2l-a1-m1-cC_1f2l-a1-m1-cD
44 1f2l-a1-m1-cA 64 47 0.2464 0.2656 0.3617 2.21e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD
45 1f2l-a1-m1-cD 70 47 0.2464 0.2429 0.3617 2.42e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
46 4oij-a1-m1-cB 71 42 0.1884 0.1831 0.3095 0.003 4oij-a1-m1-cA_4oij-a1-m1-cB
47 4oij-a1-m1-cA 71 42 0.1884 0.1831 0.3095 0.003 4oij-a1-m1-cA_4oij-a1-m1-cB
48 2jp1-a1-m1-cB 60 55 0.2319 0.2667 0.2909 0.003 2jp1-a1-m1-cA_2jp1-a1-m1-cB
49 2jp1-a1-m1-cA 60 55 0.2319 0.2667 0.2909 0.003 2jp1-a1-m1-cA_2jp1-a1-m1-cB
50 5eki-a7-m1-cA 72 62 0.2464 0.2361 0.2742 0.018 5eki-a7-m1-cF_5eki-a7-m1-cA
51 5eki-a7-m1-cF 70 61 0.2464 0.2429 0.2787 0.022 5eki-a7-m1-cF_5eki-a7-m1-cA
52 2n54-a1-m1-cB 66 55 0.2029 0.2121 0.2545 0.031 2n54-a1-m1-cA_2n54-a1-m1-cB
53 2n54-a1-m1-cA 66 55 0.2029 0.2121 0.2545 0.031 2n54-a1-m1-cA_2n54-a1-m1-cB
54 2hci-a1-m1-cB 65 59 0.2319 0.2462 0.2712 0.23 2hci-a1-m1-cB_2hci-a1-m1-cA
55 2hci-a1-m1-cA 68 59 0.2319 0.2353 0.2712 0.25 2hci-a1-m1-cB_2hci-a1-m1-cA
56 1tvx-a1-m1-cD 71 30 0.1449 0.1408 0.3333 1.8 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
57 1tvx-a1-m1-cB 71 30 0.1449 0.1408 0.3333 1.8 1tvx-a1-m1-cB_1tvx-a1-m1-cD
58 1tvx-a1-m1-cC 64 30 0.1449 0.1562 0.3333 2.0 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
59 1tvx-a1-m1-cA 64 30 0.1449 0.1562 0.3333 2.0 1tvx-a1-m1-cA_1tvx-a1-m1-cC
60 4wj1-a2-m2-cA 278 41 0.1594 0.0396 0.2683 2.3 4wj1-a2-m1-cA_4wj1-a2-m2-cA
61 4wj1-a2-m1-cA 278 41 0.1594 0.0396 0.2683 2.3 4wj1-a2-m1-cA_4wj1-a2-m2-cA
62 1rod-a1-m1-cB 72 43 0.1449 0.1389 0.2326 5.8 1rod-a1-m1-cA_1rod-a1-m1-cB
63 1rod-a1-m1-cA 72 43 0.1449 0.1389 0.2326 5.8 1rod-a1-m1-cA_1rod-a1-m1-cB
64 1qe6-a3-m2-cB 71 39 0.1884 0.1831 0.3333 7.2 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
65 1qe6-a3-m2-cA 68 39 0.1884 0.1912 0.3333 7.3 1qe6-a3-m2-cA_1qe6-a3-m2-cB
66 1qe6-a3-m1-cD 72 39 0.1884 0.1806 0.3333 7.8 1qe6-a3-m2-cB_1qe6-a3-m1-cD
67 2mgs-a1-m1-cB 71 57 0.2029 0.1972 0.2456 8.2 2mgs-a1-m1-cA_2mgs-a1-m1-cB
68 2mgs-a1-m1-cA 71 57 0.2029 0.1972 0.2456 8.2 2mgs-a1-m1-cA_2mgs-a1-m1-cB
69 3tlf-a1-m1-cC 252 31 0.1594 0.0437 0.3548 8.9 3tlf-a1-m1-cC_3tlf-a1-m1-cF
70 3tlf-a1-m1-cB 252 31 0.1594 0.0437 0.3548 8.9 3tlf-a1-m1-cB_3tlf-a1-m1-cF
71 3tlf-a3-m1-cF 253 31 0.1594 0.0435 0.3548 8.9 3tlf-a3-m1-cF_3tlf-a3-m1-cE
72 3tlf-a1-m1-cF 253 31 0.1594 0.0435 0.3548 8.9 3tlf-a1-m1-cB_3tlf-a1-m1-cF, 3tlf-a1-m1-cC_3tlf-a1-m1-cF
73 3tlf-a3-m1-cE 254 31 0.1594 0.0433 0.3548 8.9 3tlf-a3-m1-cF_3tlf-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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