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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GTPEVKVASSEDVDLPCTAPWDPQVPYTVSWVKLLERPYSLKIRNTTSSNSGTYRCTLQD
PDGQRNLSGKVILRVTGSP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5mj0-a1-m1-cB 79 79 1.0000 1.0000 1.0000 1.05e-53 5mj0-a1-m1-cB_5mj0-a1-m1-cA
2 5mj0-a1-m1-cA 80 79 0.9873 0.9750 0.9873 4.94e-51 5mj0-a1-m1-cB_5mj0-a1-m1-cA
3 4f8q-a1-m2-cA 208 23 0.1519 0.0577 0.5217 0.024 4f8q-a1-m1-cA_4f8q-a1-m2-cA
4 4f8q-a1-m1-cA 208 23 0.1519 0.0577 0.5217 0.024 4f8q-a1-m1-cA_4f8q-a1-m2-cA
5 4f80-a1-m2-cA 209 23 0.1519 0.0574 0.5217 0.029 4f80-a1-m1-cA_4f80-a1-m2-cA
6 4f80-a1-m1-cA 209 23 0.1519 0.0574 0.5217 0.029 4f80-a1-m1-cA_4f80-a1-m2-cA
7 2iep-a3-m4-cA 187 71 0.2785 0.1176 0.3099 0.050 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
8 2iep-a3-m1-cA 187 71 0.2785 0.1176 0.3099 0.050 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
9 2iep-a2-m3-cA 187 71 0.2785 0.1176 0.3099 0.050 2iep-a2-m1-cB_2iep-a2-m3-cA
10 2iep-a3-m4-cB 187 71 0.2785 0.1176 0.3099 0.050 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
11 2iep-a3-m1-cB 187 71 0.2785 0.1176 0.3099 0.050 2iep-a3-m1-cB_2iep-a3-m4-cB
12 2iep-a2-m1-cB 187 71 0.2785 0.1176 0.3099 0.050 2iep-a2-m1-cB_2iep-a2-m3-cA
13 1cs6-a1-m2-cA 382 71 0.2658 0.0550 0.2958 0.18 1cs6-a1-m1-cA_1cs6-a1-m2-cA
14 1cs6-a1-m1-cA 382 71 0.2658 0.0550 0.2958 0.18 1cs6-a1-m1-cA_1cs6-a1-m2-cA
15 6u6t-a1-m1-cA 268 47 0.1899 0.0560 0.3191 0.29 6u6t-a1-m1-cA_6u6t-a1-m1-cB
16 6u6t-a1-m1-cB 271 47 0.1899 0.0554 0.3191 0.29 6u6t-a1-m1-cA_6u6t-a1-m1-cB
17 1evt-a1-m1-cD 192 75 0.2658 0.1094 0.2800 0.31 1evt-a1-m1-cC_1evt-a1-m1-cD
18 7nmu-a1-m1-cAAA 174 85 0.3671 0.1667 0.3412 1.1 7nmu-a1-m1-cAAA_7nmu-a1-m1-cBBB
19 7nmu-a1-m1-cBBB 178 85 0.3671 0.1629 0.3412 1.2 7nmu-a1-m1-cAAA_7nmu-a1-m1-cBBB
20 5t89-a1-m1-cY 597 53 0.2025 0.0268 0.3019 1.4 5t89-a1-m1-cX_5t89-a1-m1-cY
21 5t89-a1-m1-cX 596 53 0.2025 0.0268 0.3019 1.4 5t89-a1-m1-cX_5t89-a1-m1-cY
22 5noi-a1-m2-cA 198 74 0.2911 0.1162 0.3108 1.8 5noi-a1-m1-cA_5noi-a1-m2-cA
23 5noi-a1-m1-cA 198 74 0.2911 0.1162 0.3108 1.8 5noi-a1-m1-cA_5noi-a1-m2-cA
24 6igt-a1-m1-cD 116 37 0.1519 0.1034 0.3243 2.6 6igt-a1-m1-cC_6igt-a1-m1-cD, 6igt-a1-m1-cD_6igt-a1-m1-cA
25 6igt-a1-m1-cC 116 37 0.1519 0.1034 0.3243 2.6 6igt-a1-m1-cC_6igt-a1-m1-cD
26 2vaj-a1-m2-cA 93 24 0.1266 0.1075 0.4167 3.7 2vaj-a1-m1-cA_2vaj-a1-m2-cA
27 2vaj-a1-m1-cA 93 24 0.1266 0.1075 0.4167 3.7 2vaj-a1-m1-cA_2vaj-a1-m2-cA
28 1h5b-a2-m1-cD 111 29 0.1646 0.1171 0.4483 4.1 1h5b-a2-m1-cD_1h5b-a2-m1-cC
29 1h5b-a2-m1-cC 113 29 0.1646 0.1150 0.4483 4.2 1h5b-a2-m1-cD_1h5b-a2-m1-cC
30 4zb7-a2-m1-cC 149 25 0.1519 0.0805 0.4800 4.3 4zb7-a2-m1-cC_4zb7-a2-m1-cD
31 6isb-a1-m1-cB 218 36 0.1646 0.0596 0.3611 4.7 6isb-a1-m1-cB_6isb-a1-m1-cA, 6isb-a1-m1-cC_6isb-a1-m1-cB
32 6isb-a1-m1-cA 221 36 0.1646 0.0588 0.3611 5.0 6isb-a1-m1-cB_6isb-a1-m1-cA, 6isb-a1-m1-cC_6isb-a1-m1-cA
33 6o3o-a1-m3-cA 218 36 0.1646 0.0596 0.3611 5.2 6o3o-a1-m1-cB_6o3o-a1-m3-cA
34 3p2t-a2-m2-cA 194 60 0.2278 0.0928 0.3000 5.4 3p2t-a2-m1-cA_3p2t-a2-m2-cA
35 3p2t-a2-m1-cA 194 60 0.2278 0.0928 0.3000 5.4 3p2t-a2-m1-cA_3p2t-a2-m2-cA
36 7ol2-a1-m1-cB 568 65 0.2658 0.0370 0.3231 5.6 7ol2-a1-m1-cA_7ol2-a1-m1-cB
37 7ol2-a1-m1-cB 568 88 0.2405 0.0335 0.2159 6.0 7ol2-a1-m1-cA_7ol2-a1-m1-cB
38 7ol2-a1-m1-cA 568 65 0.2658 0.0370 0.3231 5.6 7ol2-a1-m1-cA_7ol2-a1-m1-cB
39 7ol2-a1-m1-cA 568 88 0.2405 0.0335 0.2159 6.0 7ol2-a1-m1-cA_7ol2-a1-m1-cB
40 6igo-a1-m1-cC 122 34 0.1392 0.0902 0.3235 7.4 6igo-a1-m1-cA_6igo-a1-m1-cC
41 6igo-a1-m1-cA 120 34 0.1392 0.0917 0.3235 8.0 6igo-a1-m1-cA_6igo-a1-m1-cC
42 6igt-a1-m1-cA 117 34 0.1392 0.0940 0.3235 8.6 6igt-a1-m1-cD_6igt-a1-m1-cA
43 2v5y-a1-m2-cA 564 24 0.1139 0.0160 0.3750 9.5 2v5y-a1-m1-cA_2v5y-a1-m2-cA
44 2v5y-a1-m1-cA 564 24 0.1139 0.0160 0.3750 9.5 2v5y-a1-m1-cA_2v5y-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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