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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
GTQGFAVLSYVYEHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGH
LQCLPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bkf-a2-m2-cA 66 66 1.0000 1.0000 1.0000 7.21e-44 3bkf-a2-m1-cA_3bkf-a2-m2-cA
2 3bkf-a2-m1-cA 66 66 1.0000 1.0000 1.0000 7.21e-44 3bkf-a2-m1-cA_3bkf-a2-m2-cA
3 3bkf-a1-m4-cA 66 66 1.0000 1.0000 1.0000 7.21e-44 3bkf-a1-m2-cA_3bkf-a1-m4-cA
4 3bkf-a1-m2-cA 66 66 1.0000 1.0000 1.0000 7.21e-44 3bkf-a1-m2-cA_3bkf-a1-m4-cA
5 3od2-a1-m2-cB 129 83 1.0000 0.5116 0.7952 3.09e-40 3od2-a1-m2-cB_3od2-a1-m1-cA
6 3od2-a1-m1-cA 132 83 1.0000 0.5000 0.7952 3.20e-40 3od2-a1-m2-cB_3od2-a1-m1-cA
7 1q5y-a1-m1-cD 80 79 0.9848 0.8125 0.8228 2.19e-39 1q5y-a1-m1-cD_1q5y-a1-m1-cB, 1q5y-a1-m1-cD_1q5y-a1-m1-cC
8 1q5y-a1-m1-cB 83 82 0.9848 0.7831 0.7927 6.94e-39 1q5y-a1-m1-cD_1q5y-a1-m1-cB
9 1q5y-a1-m1-cC 82 81 0.9697 0.7805 0.7901 4.36e-38 1q5y-a1-m1-cD_1q5y-a1-m1-cC
10 2hzv-a2-m1-cH 129 83 0.9848 0.5039 0.7831 2.49e-37 2hzv-a2-m1-cF_2hzv-a2-m1-cH
11 2hzv-a2-m1-cF 129 83 0.9848 0.5039 0.7831 2.49e-37 2hzv-a2-m1-cF_2hzv-a2-m1-cH
12 2hzv-a1-m1-cB 129 83 0.9848 0.5039 0.7831 2.49e-37 2hzv-a1-m1-cA_2hzv-a1-m1-cB
13 2hzv-a1-m1-cA 129 83 0.9848 0.5039 0.7831 2.49e-37 2hzv-a1-m1-cA_2hzv-a1-m1-cB
14 2bj8-a1-m2-cB 138 47 0.2727 0.1304 0.3830 8.96e-08 2bj8-a1-m1-cA_2bj8-a1-m2-cB
15 2bj7-a1-m2-cB 138 47 0.2727 0.1304 0.3830 8.96e-08 2bj7-a1-m2-cA_2bj7-a1-m2-cB
16 2bj1-a1-m2-cB 132 47 0.2727 0.1364 0.3830 9.01e-08 2bj1-a1-m1-cA_2bj1-a1-m2-cB, 2bj1-a1-m2-cA_2bj1-a1-m2-cB
17 2bj1-a1-m2-cA 132 47 0.2727 0.1364 0.3830 9.01e-08 2bj1-a1-m2-cA_2bj1-a1-m2-cB
18 2bj1-a1-m1-cA 132 47 0.2727 0.1364 0.3830 9.01e-08 2bj1-a1-m1-cA_2bj1-a1-m2-cB
19 2bj8-a1-m1-cA 136 47 0.2727 0.1324 0.3830 9.57e-08 2bj8-a1-m1-cA_2bj8-a1-m2-cB
20 2bj7-a1-m2-cA 136 47 0.2727 0.1324 0.3830 9.57e-08 2bj7-a1-m2-cA_2bj7-a1-m2-cB
21 4xsc-a2-m1-cC 264 43 0.1818 0.0455 0.2791 3.7 4xsc-a2-m1-cC_4xsc-a2-m1-cD
22 4xsc-a2-m1-cD 282 43 0.1818 0.0426 0.2791 4.3 4xsc-a2-m1-cC_4xsc-a2-m1-cD
23 7rro-a1-m1-cF1 421 31 0.1515 0.0238 0.3226 5.6 7rro-a1-m1-cF0_7rro-a1-m1-cF1
24 3kb5-a2-m2-cA 193 27 0.1667 0.0570 0.4074 7.9 3kb5-a2-m1-cA_3kb5-a2-m2-cA
25 3kb5-a2-m1-cA 193 27 0.1667 0.0570 0.4074 7.9 3kb5-a2-m1-cA_3kb5-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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