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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
GTRYVTHKQLDEKLKNFVTKTEFKEFQTVVMESFAVQNQNIDAQGEQIKELQVEQKAQGK
TLQLILEALQGINKRLDNLES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ba2-a1-m1-cC 81 81 1.0000 1.0000 1.0000 2.47e-53 2ba2-a1-m1-cA_2ba2-a1-m1-cC
2 2ba2-a1-m1-cA 81 81 1.0000 1.0000 1.0000 2.47e-53 2ba2-a1-m1-cA_2ba2-a1-m1-cC
3 6s54-a1-m1-cC 447 25 0.1481 0.0268 0.4800 3.5 6s54-a1-m1-cC_6s54-a1-m1-cD
4 6s54-a1-m1-cD 449 25 0.1481 0.0267 0.4800 3.5 6s54-a1-m1-cC_6s54-a1-m1-cD, 6s54-a1-m1-cD_6s54-a1-m1-cA
5 6s54-a1-m1-cA 453 25 0.1481 0.0265 0.4800 3.5 6s54-a1-m1-cD_6s54-a1-m1-cA
6 3gza-a1-m1-cB 425 48 0.1728 0.0329 0.2917 5.6 3gza-a1-m1-cB_3gza-a1-m1-cA
7 3gza-a1-m1-cA 432 48 0.1728 0.0324 0.2917 5.6 3gza-a1-m1-cB_3gza-a1-m1-cA
8 5tka-a1-m2-cA 167 34 0.1358 0.0659 0.3235 7.8 5tka-a1-m1-cA_5tka-a1-m2-cA
9 5tka-a1-m1-cA 167 34 0.1358 0.0659 0.3235 7.8 5tka-a1-m1-cA_5tka-a1-m2-cA
10 5tk8-a1-m2-cA 191 34 0.1358 0.0576 0.3235 8.9 5tk8-a1-m1-cA_5tk8-a1-m2-cA
11 5tk8-a1-m1-cA 191 34 0.1358 0.0576 0.3235 8.9 5tk8-a1-m1-cA_5tk8-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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