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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
GTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gpe-a2-m1-cC 46 46 1.0000 1.0000 1.0000 2.87e-29 2gpe-a2-m1-cC_2gpe-a2-m1-cD
2 2gpe-a2-m1-cD 48 46 1.0000 0.9583 1.0000 3.00e-29 2gpe-a2-m1-cC_2gpe-a2-m1-cD
3 2jxi-a1-m1-cB 45 44 0.7609 0.7778 0.7955 1.02e-21 2jxi-a1-m1-cA_2jxi-a1-m1-cB
4 2jxi-a1-m1-cA 45 44 0.7609 0.7778 0.7955 1.02e-21 2jxi-a1-m1-cA_2jxi-a1-m1-cB
5 6iya-a2-m1-cD 48 41 0.3043 0.2917 0.3415 0.001 6iya-a2-m1-cC_6iya-a2-m1-cD
6 6iya-a2-m1-cC 45 41 0.3043 0.3111 0.3415 0.001 6iya-a2-m1-cC_6iya-a2-m1-cD
7 3ioy-a1-m1-cB 270 25 0.2609 0.0444 0.4800 0.52 3ioy-a1-m1-cB_3ioy-a1-m1-cA
8 3ioy-a1-m1-cA 277 25 0.2609 0.0433 0.4800 0.52 3ioy-a1-m1-cB_3ioy-a1-m1-cA
9 4kh1-a1-m3-cC 310 21 0.2174 0.0323 0.4762 1.7 4kh1-a1-m2-cA_4kh1-a1-m3-cC
10 4kh1-a1-m2-cA 310 21 0.2174 0.0323 0.4762 1.7 4kh1-a1-m2-cA_4kh1-a1-m3-cC
11 4kh0-a1-m3-cC 310 21 0.2174 0.0323 0.4762 1.7 4kh0-a1-m2-cC_4kh0-a1-m3-cC
12 4kh0-a1-m2-cC 310 21 0.2174 0.0323 0.4762 1.7 4kh0-a1-m2-cC_4kh0-a1-m3-cC
13 2qgf-a1-m3-cC 310 21 0.2174 0.0323 0.4762 1.7 2qgf-a1-m3-cA_2qgf-a1-m3-cC
14 2qgf-a1-m3-cA 310 21 0.2174 0.0323 0.4762 1.7 2qgf-a1-m3-cA_2qgf-a1-m3-cC
15 1raf-a1-m3-cC 310 21 0.2174 0.0323 0.4762 1.7 1raf-a1-m2-cA_1raf-a1-m3-cC
16 1raf-a1-m2-cA 310 21 0.2174 0.0323 0.4762 1.7 1raf-a1-m2-cA_1raf-a1-m3-cC
17 6sbx-a1-m2-cC 55 19 0.1957 0.1636 0.4737 4.6 6sbx-a1-m1-cC_6sbx-a1-m2-cC
18 6sbx-a1-m1-cC 55 19 0.1957 0.1636 0.4737 4.6 6sbx-a1-m1-cB_6sbx-a1-m1-cC, 6sbx-a1-m1-cC_6sbx-a1-m2-cC
19 6sbx-a1-m1-cB 48 19 0.1957 0.1875 0.4737 5.3 6sbx-a1-m1-cB_6sbx-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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