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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GTVAAKSEIQIDNDEVRVTEWRLPPGSATGHHTHGDYVVVPADGETIVAPDGTRSLAQLK
TGRSYARKAGVQHDVRNESTAEIVFLEIELKAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lag-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.19e-64 3lag-a1-m1-cA_3lag-a1-m1-cB
2 3lag-a1-m1-cA 92 92 0.9892 1.0000 1.0000 6.81e-64 3lag-a1-m1-cA_3lag-a1-m1-cB
3 2fqp-a3-m2-cA 92 90 0.5054 0.5109 0.5222 1.81e-26 2fqp-a3-m1-cD_2fqp-a3-m2-cA, 2fqp-a3-m2-cB_2fqp-a3-m2-cA
4 2fqp-a3-m1-cD 92 90 0.5054 0.5109 0.5222 1.95e-26 2fqp-a3-m1-cD_2fqp-a3-m2-cA
5 2fqp-a3-m1-cC 93 90 0.5054 0.5054 0.5222 2.12e-26 2fqp-a3-m2-cB_2fqp-a3-m1-cC
6 2fqp-a3-m2-cB 90 89 0.4946 0.5111 0.5169 8.10e-26 2fqp-a3-m2-cB_2fqp-a3-m1-cC, 2fqp-a3-m2-cB_2fqp-a3-m2-cA
7 1o4t-a1-m1-cB 115 70 0.2043 0.1652 0.2714 0.20 1o4t-a1-m1-cA_1o4t-a1-m1-cB
8 1o4t-a1-m1-cA 115 70 0.2043 0.1652 0.2714 0.20 1o4t-a1-m1-cA_1o4t-a1-m1-cB
9 6lmx-a1-m1-cI 240 73 0.1828 0.0708 0.2329 0.86 6lmx-a1-m1-cH_6lmx-a1-m1-cI
10 6lmx-a1-m1-cH 240 73 0.1828 0.0708 0.2329 0.86 6lmx-a1-m1-cH_6lmx-a1-m1-cI
11 2rd1-a5-m2-cB 56 53 0.1720 0.2857 0.3019 4.3 2rd1-a5-m1-cB_2rd1-a5-m2-cB
12 2rd1-a5-m1-cB 56 53 0.1720 0.2857 0.3019 4.3 2rd1-a5-m1-cB_2rd1-a5-m2-cB
13 4rd7-a1-m2-cA 114 61 0.1720 0.1404 0.2623 7.4 4rd7-a1-m1-cA_4rd7-a1-m2-cA
14 4rd7-a1-m1-cA 114 61 0.1720 0.1404 0.2623 7.4 4rd7-a1-m1-cA_4rd7-a1-m2-cA
15 1uik-a1-m1-cB 363 81 0.2258 0.0579 0.2593 9.1 1uik-a1-m1-cB_1uik-a1-m1-cC
16 1uik-a1-m1-cC 364 81 0.2258 0.0577 0.2593 9.1 1uik-a1-m1-cB_1uik-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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