Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GTVFTTVEDLGSKILLTCSLDDSTEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGE
YSCVFLPEPMGTANIQLHG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i84-a2-m2-cA 79 79 1.0000 1.0000 1.0000 1.83e-54 3i84-a2-m2-cA_3i84-a2-m2-cB
2 3i84-a2-m1-cA 79 79 1.0000 1.0000 1.0000 1.83e-54 3i84-a2-m1-cA_3i84-a2-m2-cB
3 3i84-a2-m2-cB 85 79 0.9873 0.9176 0.9873 8.87e-52 3i84-a2-m1-cA_3i84-a2-m2-cB, 3i84-a2-m1-cB_3i84-a2-m2-cB, 3i84-a2-m2-cA_3i84-a2-m2-cB
4 3i84-a2-m1-cB 85 79 0.9873 0.9176 0.9873 8.87e-52 3i84-a2-m1-cB_3i84-a2-m2-cB
5 1nbq-a1-m1-cB 208 32 0.1266 0.0481 0.3125 0.19 1nbq-a1-m1-cB_1nbq-a1-m1-cA
6 1nbq-a1-m1-cA 209 32 0.1266 0.0478 0.3125 0.19 1nbq-a1-m1-cB_1nbq-a1-m1-cA
7 6gsi-a1-m3-cH 200 68 0.2405 0.0950 0.2794 0.31 6gsi-a1-m3-cG_6gsi-a1-m3-cH
8 6gsi-a1-m3-cG 200 68 0.2405 0.0950 0.2794 0.32 6gsi-a1-m3-cG_6gsi-a1-m3-cH
9 1c7s-a1-m2-cA 858 51 0.2025 0.0186 0.3137 1.8 1c7s-a1-m1-cA_1c7s-a1-m2-cA
10 1c7s-a1-m1-cA 858 51 0.2025 0.0186 0.3137 1.8 1c7s-a1-m1-cA_1c7s-a1-m2-cA
11 3naw-a3-m1-cA 607 33 0.1646 0.0214 0.3939 3.0 3naw-a3-m1-cA_3naw-a3-m1-cB
12 3naw-a3-m1-cB 610 33 0.1646 0.0213 0.3939 3.0 3naw-a3-m1-cA_3naw-a3-m1-cB
13 3sqv-a3-m1-cB 606 33 0.1646 0.0215 0.3939 3.0 3sqv-a3-m1-cA_3sqv-a3-m1-cB
14 3sqv-a3-m1-cA 606 33 0.1646 0.0215 0.3939 3.0 3sqv-a3-m1-cA_3sqv-a3-m1-cB
15 4eq7-a3-m1-cB 313 20 0.1013 0.0256 0.4000 7.1 4eq7-a3-m1-cA_4eq7-a3-m1-cB
16 4eq7-a3-m1-cA 313 20 0.1013 0.0256 0.4000 7.1 4eq7-a3-m1-cA_4eq7-a3-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600