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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
GVCGSVWGQNDIAYRCRTCENDPTCAICVPCFQNGDHNSHDYSIIYTGGGCCDCGDETAW
KPDGFCSNHK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xwf-a1-m2-cA 73 70 1.0000 0.9589 1.0000 6.88e-48 7xwf-a1-m1-cA_7xwf-a1-m2-cA
2 7xwf-a1-m1-cA 73 70 1.0000 0.9589 1.0000 6.88e-48 7xwf-a1-m1-cA_7xwf-a1-m2-cA
3 7xwg-a1-m1-cB 72 70 1.0000 0.9722 1.0000 7.55e-48 7xwg-a1-m1-cA_7xwg-a1-m1-cB
4 7xwg-a1-m1-cA 72 70 1.0000 0.9722 1.0000 7.55e-48 7xwg-a1-m1-cA_7xwg-a1-m1-cB
5 7xwe-a1-m1-cB 76 70 1.0000 0.9211 1.0000 9.04e-48 7xwe-a1-m1-cA_7xwe-a1-m1-cB
6 7xwe-a1-m1-cA 76 70 1.0000 0.9211 1.0000 9.04e-48 7xwe-a1-m1-cA_7xwe-a1-m1-cB
7 7xwd-a1-m2-cA 70 70 1.0000 1.0000 1.0000 9.08e-48 7xwd-a1-m1-cA_7xwd-a1-m2-cA
8 7xwd-a1-m1-cA 70 70 1.0000 1.0000 1.0000 9.08e-48 7xwd-a1-m1-cA_7xwd-a1-m2-cA
9 6kgi-a1-m2-cB 86 69 0.3857 0.3140 0.3913 1.28e-07 6kgi-a1-m1-cB_6kgi-a1-m2-cB
10 6kgi-a1-m1-cB 86 69 0.3857 0.3140 0.3913 1.28e-07 6kgi-a1-m1-cB_6kgi-a1-m2-cB
11 5vmd-a2-m1-cD 66 49 0.2857 0.3030 0.4082 0.070 5vmd-a2-m1-cD_5vmd-a2-m1-cB
12 5vmd-a2-m1-cB 72 49 0.2857 0.2778 0.4082 0.18 5vmd-a2-m1-cD_5vmd-a2-m1-cB
13 2v8h-a2-m1-cD 431 28 0.1429 0.0232 0.3571 4.5 2v8h-a2-m1-cD_2v8h-a2-m1-cC
14 2v8h-a2-m1-cC 432 28 0.1429 0.0231 0.3571 4.5 2v8h-a2-m1-cD_2v8h-a2-m1-cC
15 1r3n-a3-m1-cE 433 28 0.1429 0.0231 0.3571 4.6 1r3n-a3-m1-cE_1r3n-a3-m1-cF
16 1r3n-a3-m1-cF 438 28 0.1429 0.0228 0.3571 4.6 1r3n-a3-m1-cE_1r3n-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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