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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GVEETTPQNTCQEFDNPKSTPVAFWVVNRNTDFSGGDYVDWHEVETVSVPKLQECHKNPA
AKLGDLSAVIKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4xvv-a1-m1-cA 72 72 1.0000 1.0000 1.0000 3.61e-50 4xvv-a1-m1-cB_4xvv-a1-m1-cA
2 4xvv-a1-m1-cB 68 68 0.9444 1.0000 1.0000 2.93e-47 4xvv-a1-m1-cB_4xvv-a1-m1-cA
3 2myj-a1-m1-cB 79 64 0.3889 0.3544 0.4375 3.07e-09 2myj-a1-m1-cA_2myj-a1-m1-cB
4 2myj-a1-m1-cA 79 64 0.3889 0.3544 0.4375 3.07e-09 2myj-a1-m1-cA_2myj-a1-m1-cB
5 2xuv-a2-m1-cD 62 49 0.2778 0.3226 0.4082 6.17e-06 2xuv-a2-m1-cC_2xuv-a2-m1-cD
6 2xuv-a2-m1-cC 62 49 0.2778 0.3226 0.4082 6.17e-06 2xuv-a2-m1-cC_2xuv-a2-m1-cD
7 3ayj-a1-m1-cB 684 39 0.1667 0.0175 0.3077 2.6 3ayj-a1-m1-cA_3ayj-a1-m1-cB
8 3ayj-a1-m1-cA 684 39 0.1667 0.0175 0.3077 2.6 3ayj-a1-m1-cA_3ayj-a1-m1-cB
9 5ym6-a2-m1-cD 95 24 0.1389 0.1053 0.4167 6.2 5ym6-a2-m1-cD_5ym6-a2-m1-cC
10 5ym6-a2-m1-cC 99 21 0.1389 0.1010 0.4762 6.5 5ym6-a2-m1-cD_5ym6-a2-m1-cC
11 6dbb-a3-m3-cC 502 36 0.1806 0.0259 0.3611 7.2 6dbb-a3-m1-cC_6dbb-a3-m3-cC
12 6dbb-a3-m1-cC 502 36 0.1806 0.0259 0.3611 7.2 6dbb-a3-m1-cC_6dbb-a3-m3-cC
13 3sf0-a1-m2-cA 247 23 0.1250 0.0364 0.3913 7.7 3sf0-a1-m1-cA_3sf0-a1-m2-cA
14 3sf0-a1-m1-cA 247 23 0.1250 0.0364 0.3913 7.7 3sf0-a1-m1-cA_3sf0-a1-m2-cA
15 2qyo-a1-m1-cB 352 48 0.2500 0.0511 0.3750 8.0 2qyo-a1-m1-cB_2qyo-a1-m1-cA
16 2qyo-a1-m1-cA 353 48 0.2500 0.0510 0.3750 8.0 2qyo-a1-m1-cB_2qyo-a1-m1-cA
17 4cn6-a1-m1-cB 649 11 0.1111 0.0123 0.7273 9.5 4cn6-a1-m1-cA_4cn6-a1-m1-cB
18 4cn6-a1-m1-cA 649 11 0.1111 0.0123 0.7273 9.5 4cn6-a1-m1-cA_4cn6-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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