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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
GVEHYTYEEYAKHIQELKDYAKDPNAVKDVSQKDLEETIKKEQELEKIKTEGLKIKPIT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n7m-a2-m3-cD 59 59 1.0000 1.0000 1.0000 4.00e-36 6n7m-a2-m3-cD_6n7m-a2-m1-cC
2 6n7m-a2-m1-cC 60 59 1.0000 0.9833 1.0000 4.28e-36 6n7m-a2-m3-cD_6n7m-a2-m1-cC
3 6k9l-a1-m1-cB 2551 57 0.2542 0.0059 0.2632 3.4 6k9l-a1-m1-cB_6k9l-a1-m1-cA
4 6k9l-a1-m1-cA 2552 57 0.2542 0.0059 0.2632 3.4 6k9l-a1-m1-cB_6k9l-a1-m1-cA
5 3c3n-a1-m1-cD 311 51 0.2203 0.0418 0.2549 7.0 3c3n-a1-m1-cC_3c3n-a1-m1-cD
6 3c3n-a1-m1-cC 311 51 0.2203 0.0418 0.2549 7.0 3c3n-a1-m1-cC_3c3n-a1-m1-cD
7 3w88-a1-m1-cB 314 51 0.2203 0.0414 0.2549 7.0 3w88-a1-m1-cA_3w88-a1-m1-cB
8 3w88-a1-m1-cA 314 51 0.2203 0.0414 0.2549 7.0 3w88-a1-m1-cA_3w88-a1-m1-cB
9 7x99-a2-m5-cB 294 31 0.1695 0.0340 0.3226 7.3 7x99-a2-m3-cB_7x99-a2-m5-cB
10 7x99-a2-m3-cB 294 31 0.1695 0.0340 0.3226 7.3 7x99-a2-m3-cB_7x99-a2-m5-cB
11 8bny-a1-m1-cD 36 30 0.2373 0.3889 0.4667 9.0 8bny-a1-m1-cA_8bny-a1-m1-cD, 8bny-a1-m1-cC_8bny-a1-m1-cD
12 8bny-a1-m1-cA 35 30 0.2373 0.4000 0.4667 9.3 8bny-a1-m1-cA_8bny-a1-m1-cD
13 3t3z-a6-m1-cD 464 49 0.2542 0.0323 0.3061 9.8 3t3z-a6-m1-cB_3t3z-a6-m1-cD
14 3t3z-a6-m1-cB 464 49 0.2542 0.0323 0.3061 9.8 3t3z-a6-m1-cB_3t3z-a6-m1-cD

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Reference:
Jacob Schwartz et al.

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