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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVEE
ENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zm0-a3-m2-cA 96 96 1.0000 1.0000 1.0000 2.30e-69 1zm0-a3-m1-cA_1zm0-a3-m2-cA
2 1zm0-a3-m1-cA 96 96 1.0000 1.0000 1.0000 2.30e-69 1zm0-a3-m1-cA_1zm0-a3-m2-cA
3 1fhw-a3-m1-cA 122 114 0.3438 0.2705 0.2895 1.76e-08 1fhw-a3-m1-cA_1fhw-a3-m1-cB
4 1fhw-a3-m1-cB 126 114 0.3438 0.2619 0.2895 1.79e-08 1fhw-a3-m1-cA_1fhw-a3-m1-cB
5 6u3g-a1-m1-cB 397 114 0.3438 0.0831 0.2895 1.08e-07 6u3g-a1-m1-cA_6u3g-a1-m1-cB
6 6u3g-a1-m1-cA 397 114 0.3438 0.0831 0.2895 1.08e-07 6u3g-a1-m1-cA_6u3g-a1-m1-cB
7 6u3e-a1-m1-cB 397 114 0.3438 0.0831 0.2895 1.08e-07 6u3e-a1-m1-cA_6u3e-a1-m1-cB
8 6u3e-a1-m1-cA 397 114 0.3438 0.0831 0.2895 1.08e-07 6u3e-a1-m1-cA_6u3e-a1-m1-cB
9 1fb8-a2-m4-cA 106 92 0.3125 0.2830 0.3261 6.63e-05 1fb8-a2-m2-cA_1fb8-a2-m4-cA
10 1fb8-a2-m2-cA 106 92 0.3125 0.2830 0.3261 6.63e-05 1fb8-a2-m2-cA_1fb8-a2-m4-cA
11 1u5d-a8-m7-cD 108 104 0.2604 0.2315 0.2404 7.99e-04 1u5d-a8-m1-cC_1u5d-a8-m7-cD
12 1u5d-a6-m6-cD 108 104 0.2604 0.2315 0.2404 7.99e-04 1u5d-a6-m1-cA_1u5d-a6-m6-cD
13 1u5d-a6-m1-cA 108 104 0.2604 0.2315 0.2404 7.99e-04 1u5d-a6-m1-cA_1u5d-a6-m6-cD
14 1u5d-a8-m1-cC 107 104 0.2604 0.2336 0.2404 0.001 1u5d-a8-m1-cC_1u5d-a8-m7-cD
15 4hhv-a1-m1-cB 101 93 0.3021 0.2871 0.3118 0.008 4hhv-a1-m1-cB_4hhv-a1-m1-cA
16 4hhv-a1-m1-cA 103 93 0.3021 0.2816 0.3118 0.009 4hhv-a1-m1-cB_4hhv-a1-m1-cA
17 1u5f-a2-m2-cA 119 46 0.1146 0.0924 0.2391 0.42 1u5f-a2-m2-cA_1u5f-a2-m1-cA
18 1u5f-a2-m1-cA 119 46 0.1146 0.0924 0.2391 0.42 1u5f-a2-m2-cA_1u5f-a2-m1-cA
19 4h8s-a2-m1-cC 382 63 0.2396 0.0602 0.3651 0.84 4h8s-a2-m1-cD_4h8s-a2-m1-cC
20 4h8s-a2-m1-cD 373 63 0.2396 0.0617 0.3651 0.89 4h8s-a2-m1-cD_4h8s-a2-m1-cC
21 2otx-a1-m1-cA 170 46 0.1146 0.0647 0.2391 0.95 2otx-a1-m1-cB_2otx-a1-m1-cA
22 1u5e-a1-m1-cA 170 46 0.1146 0.0647 0.2391 0.95 1u5e-a1-m1-cB_1u5e-a1-m1-cA
23 2otx-a1-m1-cB 168 46 0.1146 0.0655 0.2391 1.0 2otx-a1-m1-cB_2otx-a1-m1-cA
24 1u5e-a1-m1-cB 168 46 0.1146 0.0655 0.2391 1.0 1u5e-a1-m1-cB_1u5e-a1-m1-cA
25 3via-a3-m1-cB 112 49 0.1667 0.1429 0.3265 1.4 3via-a3-m1-cA_3via-a3-m1-cB
26 3via-a3-m1-cA 112 49 0.1667 0.1429 0.3265 1.4 3via-a3-m1-cA_3via-a3-m1-cB
27 3n05-a1-m1-cA 568 57 0.1771 0.0299 0.2982 4.2 3n05-a1-m1-cB_3n05-a1-m1-cA
28 3n05-a1-m1-cB 563 57 0.1771 0.0302 0.2982 4.3 3n05-a1-m1-cB_3n05-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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