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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
GVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV
KKDQL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7wnz-a1-m1-cI 65 65 1.0000 1.0000 1.0000 1.61e-37 7wnz-a1-m1-cH_7wnz-a1-m1-cI
2 7wnz-a1-m1-cH 65 65 1.0000 1.0000 1.0000 1.61e-37 7wnz-a1-m1-cH_7wnz-a1-m1-cI
3 8a9l-a1-m3-cA 70 65 0.9846 0.9143 0.9846 1.03e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
4 8a9l-a1-m1-cA 70 65 0.9846 0.9143 0.9846 1.03e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
5 8fpt-a1-m1-cJ 74 65 0.9846 0.8649 0.9846 1.07e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ, 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
6 8fpt-a1-m1-cH 74 65 0.9846 0.8649 0.9846 1.07e-36 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
7 8fpt-a1-m1-cG 74 65 0.9846 0.8649 0.9846 1.07e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ
8 2n0a-a1-m1-cJ 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cH_2n0a-a1-m1-cJ, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
9 2n0a-a1-m1-cI 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
10 2n0a-a1-m1-cH 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cG_2n0a-a1-m1-cH, 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cH_2n0a-a1-m1-cJ
11 2n0a-a1-m1-cG 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cE_2n0a-a1-m1-cG, 2n0a-a1-m1-cF_2n0a-a1-m1-cG, 2n0a-a1-m1-cG_2n0a-a1-m1-cH
12 2n0a-a1-m1-cF 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cF_2n0a-a1-m1-cG
13 2n0a-a1-m1-cE 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cC_2n0a-a1-m1-cE, 2n0a-a1-m1-cD_2n0a-a1-m1-cE, 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cE_2n0a-a1-m1-cG
14 2n0a-a1-m1-cD 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cD_2n0a-a1-m1-cE
15 2n0a-a1-m1-cC 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cB_2n0a-a1-m1-cC, 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cC_2n0a-a1-m1-cE
16 2n0a-a1-m1-cB 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cA_2n0a-a1-m1-cB, 2n0a-a1-m1-cB_2n0a-a1-m1-cC
17 2n0a-a1-m1-cA 140 65 0.9846 0.4571 0.9846 1.21e-36 2n0a-a1-m1-cA_2n0a-a1-m1-cB
18 7wo0-a1-m1-cT 65 64 0.9846 0.9846 1.0000 1.34e-36 7wo0-a1-m1-cS_7wo0-a1-m1-cT
19 7wo0-a1-m1-cS 65 64 0.9846 0.9846 1.0000 1.34e-36 7wo0-a1-m1-cS_7wo0-a1-m1-cT
20 6xyq-a1-m1-cF 64 64 0.9692 0.9844 0.9844 6.93e-36 6xyq-a1-m1-cB_6xyq-a1-m1-cF
21 6xyq-a1-m1-cB 64 64 0.9692 0.9844 0.9844 6.93e-36 6xyq-a1-m1-cB_6xyq-a1-m1-cF
22 7v4b-a1-m1-cF 80 64 0.9692 0.7875 0.9844 8.01e-36 7v4b-a1-m1-cC_7v4b-a1-m1-cF, 7v4b-a1-m1-cD_7v4b-a1-m1-cF
23 7v4b-a1-m1-cD 80 64 0.9692 0.7875 0.9844 8.01e-36 7v4b-a1-m1-cD_7v4b-a1-m1-cF
24 7v4b-a1-m1-cC 80 64 0.9692 0.7875 0.9844 8.01e-36 7v4b-a1-m1-cC_7v4b-a1-m1-cF
25 6xyo-a1-m1-cJ 79 64 0.9692 0.7975 0.9844 8.14e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
26 6xyo-a1-m1-cF 79 64 0.9692 0.7975 0.9844 8.14e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
27 8adw-a1-m1-cJ 99 64 0.9692 0.6364 0.9844 8.56e-36 8adw-a1-m1-cI_8adw-a1-m1-cJ
28 8adw-a1-m1-cI 99 64 0.9692 0.6364 0.9844 8.56e-36 8adw-a1-m1-cI_8adw-a1-m1-cJ
29 6a6b-a1-m1-cL 63 63 0.9538 0.9841 0.9841 2.84e-35 6a6b-a1-m1-cK_6a6b-a1-m1-cL
30 6a6b-a1-m1-cK 63 63 0.9538 0.9841 0.9841 2.84e-35 6a6b-a1-m1-cK_6a6b-a1-m1-cL
31 6a6b-a1-m1-cI 63 63 0.9538 0.9841 0.9841 2.84e-35 6a6b-a1-m1-cC_6a6b-a1-m1-cI
32 6a6b-a1-m1-cC 63 63 0.9538 0.9841 0.9841 2.84e-35 6a6b-a1-m1-cC_6a6b-a1-m1-cI
33 7v4c-a1-m1-cF 62 62 0.9385 0.9839 0.9839 2.14e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF, 7v4c-a1-m1-cB_7v4c-a1-m1-cF
34 7v4c-a1-m1-cB 62 62 0.9385 0.9839 0.9839 2.14e-34 7v4c-a1-m1-cB_7v4c-a1-m1-cF
35 7v4c-a1-m1-cA 62 62 0.9385 0.9839 0.9839 2.14e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF
36 8cz3-a1-m1-cN 72 62 0.9385 0.8472 0.9839 6.66e-34 8cz3-a1-m1-cM_8cz3-a1-m1-cN
37 8cz3-a1-m1-cM 72 62 0.9385 0.8472 0.9839 6.66e-34 8cz3-a1-m1-cM_8cz3-a1-m1-cN
38 8cys-a1-m1-cO 72 62 0.9385 0.8472 0.9839 6.66e-34 8cys-a1-m1-cN_8cys-a1-m1-cO
39 8cys-a1-m1-cN 72 62 0.9385 0.8472 0.9839 6.66e-34 8cys-a1-m1-cN_8cys-a1-m1-cO
40 8aex-a1-m1-cI 71 62 0.9385 0.8592 0.9839 9.21e-34 8aex-a1-m1-cE_8aex-a1-m1-cI
41 8aex-a1-m1-cE 71 62 0.9385 0.8592 0.9839 9.21e-34 8aex-a1-m1-cE_8aex-a1-m1-cI
42 6l1u-a1-m1-cB 99 65 0.9692 0.6364 0.9692 1.53e-33 6l1u-a1-m1-cA_6l1u-a1-m1-cB
43 6l1u-a1-m1-cA 99 65 0.9692 0.6364 0.9692 1.53e-33 6l1u-a1-m1-cA_6l1u-a1-m1-cB
44 8h03-a1-m1-cF 61 61 0.9231 0.9836 0.9836 3.58e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
45 8h03-a1-m1-cB 61 61 0.9231 0.9836 0.9836 3.58e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
46 8ads-a1-m1-cJ 75 61 0.9231 0.8000 0.9836 4.38e-33 8ads-a1-m1-cI_8ads-a1-m1-cJ
47 8ads-a1-m1-cI 75 61 0.9231 0.8000 0.9836 4.38e-33 8ads-a1-m1-cI_8ads-a1-m1-cJ
48 6cu7-a1-m1-cJ 60 60 0.9077 0.9833 0.9833 1.18e-32 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
49 6cu7-a1-m1-cF 60 60 0.9077 0.9833 0.9833 1.18e-32 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
50 6osm-a1-m1-cJ 60 60 0.9077 0.9833 0.9833 1.81e-32 6osm-a1-m1-cI_6osm-a1-m1-cJ
51 6osm-a1-m1-cI 60 60 0.9077 0.9833 0.9833 1.81e-32 6osm-a1-m1-cI_6osm-a1-m1-cJ
52 8h05-a1-m1-cC 60 60 0.9077 0.9833 0.9833 2.23e-32 8h05-a1-m1-cA_8h05-a1-m1-cC
53 8h05-a1-m1-cA 60 60 0.9077 0.9833 0.9833 2.23e-32 8h05-a1-m1-cA_8h05-a1-m1-cC
54 6xyq-a1-m1-cE 81 59 0.8923 0.7160 0.9831 7.38e-32 6xyq-a1-m1-cC_6xyq-a1-m1-cE
55 6xyq-a1-m1-cC 81 59 0.8923 0.7160 0.9831 7.38e-32 6xyq-a1-m1-cC_6xyq-a1-m1-cE
56 7v4d-a1-m1-cF 58 58 0.8769 0.9828 0.9828 2.77e-31 7v4d-a1-m1-cC_7v4d-a1-m1-cF
57 7v4d-a1-m1-cC 58 58 0.8769 0.9828 0.9828 2.77e-31 7v4d-a1-m1-cC_7v4d-a1-m1-cF
58 8ceb-a1-m3-cC 58 58 0.8769 0.9828 0.9828 1.72e-30 8ceb-a1-m3-cA_8ceb-a1-m3-cC
59 8ceb-a1-m3-cA 58 58 0.8769 0.9828 0.9828 1.72e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA, 8ceb-a1-m3-cA_8ceb-a1-m3-cC
60 8ceb-a1-m1-cA 58 58 0.8769 0.9828 0.9828 1.72e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA
61 6l4s-a1-m1-cF 55 55 0.8154 0.9636 0.9636 1.21e-28 6l4s-a1-m1-cD_6l4s-a1-m1-cF, 6l4s-a1-m1-cE_6l4s-a1-m1-cF
62 6l4s-a1-m1-cE 55 55 0.8154 0.9636 0.9636 1.21e-28 6l4s-a1-m1-cE_6l4s-a1-m1-cF
63 6l4s-a1-m1-cD 55 55 0.8154 0.9636 0.9636 1.21e-28 6l4s-a1-m1-cD_6l4s-a1-m1-cF
64 7lc9-a1-m1-cG 51 51 0.7692 0.9804 0.9804 6.91e-26 7lc9-a1-m1-cL_7lc9-a1-m1-cG
65 7lc9-a1-m1-cE 51 51 0.7692 0.9804 0.9804 6.91e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
66 7lc9-a1-m1-cD 51 51 0.7692 0.9804 0.9804 6.91e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
67 7e0f-a1-m1-cF 49 49 0.7231 0.9592 0.9592 2.05e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF, 7e0f-a1-m1-cE_7e0f-a1-m1-cF
68 7e0f-a1-m1-cE 49 49 0.7231 0.9592 0.9592 2.05e-24 7e0f-a1-m1-cE_7e0f-a1-m1-cF
69 7e0f-a1-m1-cC 49 49 0.7231 0.9592 0.9592 2.05e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF
70 6cu8-a1-m1-cJ 41 41 0.6154 0.9756 0.9756 7.68e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ, 6cu8-a1-m1-cH_6cu8-a1-m1-cJ, 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
71 6cu8-a1-m1-cI 41 41 0.6154 0.9756 0.9756 7.68e-19 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
72 6cu8-a1-m1-cH 41 41 0.6154 0.9756 0.9756 7.68e-19 6cu8-a1-m1-cH_6cu8-a1-m1-cJ
73 6cu8-a1-m1-cF 41 41 0.6154 0.9756 0.9756 7.68e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ
74 7lc9-a1-m1-cK 38 38 0.5846 1.0000 1.0000 2.40e-18 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
75 7lc9-a1-m1-cJ 38 38 0.5846 1.0000 1.0000 2.40e-18 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
76 7lc9-a1-m1-cL 29 29 0.4462 1.0000 1.0000 4.24e-11 7lc9-a1-m1-cL_7lc9-a1-m1-cG
77 1u2g-a1-m1-cA 378 64 0.3846 0.0661 0.3906 0.48 1u2g-a1-m1-cB_1u2g-a1-m1-cA
78 7r9b-a1-m2-cA 223 50 0.2154 0.0628 0.2800 5.9 7r9b-a1-m1-cA_7r9b-a1-m2-cA
79 7r9b-a1-m1-cA 223 50 0.2154 0.0628 0.2800 5.9 7r9b-a1-m1-cA_7r9b-a1-m2-cA
80 2x77-a1-m1-cA 181 21 0.1385 0.0497 0.4286 6.5 2x77-a1-m1-cB_2x77-a1-m1-cA
81 2x77-a1-m1-cB 166 22 0.1385 0.0542 0.4091 6.7 2x77-a1-m1-cB_2x77-a1-m1-cA
82 2oby-a4-m4-cE 334 38 0.2308 0.0449 0.3947 9.3 2oby-a4-m1-cE_2oby-a4-m4-cE
83 2oby-a4-m1-cE 334 38 0.2308 0.0449 0.3947 9.3 2oby-a4-m1-cE_2oby-a4-m4-cE

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Reference:
Jacob Schwartz et al.

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