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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
GVNKDEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQA
ADDCEFLRAELDELRRQRED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i00-a1-m2-cB 80 80 1.0000 1.0000 1.0000 3.54e-52 3i00-a1-m1-cA_3i00-a1-m2-cB
2 2qa7-a2-m1-cC 102 76 0.9500 0.7451 1.0000 5.15e-49 2qa7-a2-m1-cD_2qa7-a2-m1-cC
3 3i00-a1-m1-cA 76 76 0.9500 1.0000 1.0000 1.50e-48 3i00-a1-m1-cA_3i00-a1-m2-cB
4 2qa7-a2-m1-cD 70 70 0.8750 1.0000 1.0000 2.05e-44 2qa7-a2-m1-cD_2qa7-a2-m1-cC
5 1hyu-a1-m2-cA 521 26 0.1375 0.0211 0.4231 2.4 1hyu-a1-m1-cA_1hyu-a1-m2-cA
6 1hyu-a1-m1-cA 521 26 0.1375 0.0211 0.4231 2.4 1hyu-a1-m1-cA_1hyu-a1-m2-cA
7 6ofp-a1-m1-cB 92 52 0.2000 0.1739 0.3077 2.6 6ofp-a1-m1-cA_6ofp-a1-m1-cB
8 6ofp-a1-m1-cA 91 52 0.2000 0.1758 0.3077 2.8 6ofp-a1-m1-cA_6ofp-a1-m1-cB
9 5jvm-a1-m1-cA 82 24 0.1625 0.1585 0.5417 4.1 5jvm-a1-m1-cB_5jvm-a1-m1-cA
10 5jvm-a1-m1-cB 79 24 0.1625 0.1646 0.5417 4.2 5jvm-a1-m1-cB_5jvm-a1-m1-cA
11 2xsj-a1-m1-cE 385 42 0.1750 0.0364 0.3333 8.2 2xsj-a1-m1-cB_2xsj-a1-m1-cE
12 2xsj-a1-m1-cB 385 42 0.1750 0.0364 0.3333 8.2 2xsj-a1-m1-cB_2xsj-a1-m1-cE
13 5to5-a1-m1-cB 140 61 0.2250 0.1286 0.2951 8.5 5to5-a1-m1-cB_5to5-a1-m1-cA
14 5to5-a1-m1-cA 141 61 0.2250 0.1277 0.2951 9.4 5to5-a1-m1-cB_5to5-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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