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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
GVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPS
KKLYVVKQEWFWGSIQMDARAGETMYLYEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3l46-a1-m1-cB 95 90 1.0000 0.9474 1.0000 2.25e-64 3l46-a1-m1-cA_3l46-a1-m1-cB
2 3l46-a1-m1-cA 90 90 1.0000 1.0000 1.0000 2.89e-64 3l46-a1-m1-cA_3l46-a1-m1-cB
3 4n40-a2-m3-cA 270 89 0.9222 0.3074 0.9326 4.65e-49 4n40-a2-m2-cA_4n40-a2-m3-cA
4 4n40-a2-m2-cA 270 89 0.9222 0.3074 0.9326 4.65e-49 4n40-a2-m2-cA_4n40-a2-m3-cA
5 6rmm-a1-m1-cD 190 101 0.2778 0.1316 0.2475 0.028 6rmm-a1-m1-cD_6rmm-a1-m1-cB
6 6rmm-a1-m1-cC 190 101 0.2778 0.1316 0.2475 0.028 6rmm-a1-m1-cC_6rmm-a1-m1-cA
7 6rmm-a1-m1-cB 196 101 0.2667 0.1224 0.2376 0.029 6rmm-a1-m1-cA_6rmm-a1-m1-cB, 6rmm-a1-m1-cD_6rmm-a1-m1-cB
8 6rmm-a1-m1-cA 196 101 0.2667 0.1224 0.2376 0.029 6rmm-a1-m1-cA_6rmm-a1-m1-cB, 6rmm-a1-m1-cC_6rmm-a1-m1-cA
9 3ueo-a2-m1-cD 186 101 0.2778 0.1344 0.2475 0.031 3ueo-a2-m1-cB_3ueo-a2-m1-cD
10 3ueo-a2-m1-cB 186 101 0.2778 0.1344 0.2475 0.031 3ueo-a2-m1-cB_3ueo-a2-m1-cD
11 3ueo-a2-m1-cB 186 27 0.1000 0.0484 0.3333 5.0 3ueo-a2-m1-cB_3ueo-a2-m1-cD
12 5u6k-a4-m1-cH 191 101 0.2778 0.1309 0.2475 0.069 5u6k-a4-m1-cD_5u6k-a4-m1-cH
13 5u6k-a4-m1-cD 190 101 0.2778 0.1316 0.2475 0.069 5u6k-a4-m1-cD_5u6k-a4-m1-cH
14 7pvh-a1-m1-cB 186 68 0.2000 0.0968 0.2647 0.84 7pvh-a1-m1-cB_7pvh-a1-m1-cA
15 7pvh-a1-m1-cA 192 68 0.2000 0.0938 0.2647 0.86 7pvh-a1-m1-cB_7pvh-a1-m1-cA
16 1pqu-a1-m1-cD 371 76 0.2111 0.0512 0.2500 7.2 1pqu-a1-m1-cA_1pqu-a1-m1-cD
17 1pqu-a1-m1-cA 371 76 0.2111 0.0512 0.2500 7.2 1pqu-a1-m1-cA_1pqu-a1-m1-cD
18 4ob7-a1-m2-cA 319 18 0.0889 0.0251 0.4444 8.3 4ob7-a1-m1-cA_4ob7-a1-m2-cA
19 4ob7-a1-m1-cA 319 18 0.0889 0.0251 0.4444 8.3 4ob7-a1-m1-cA_4ob7-a1-m2-cA
20 4ob8-a1-m2-cA 319 18 0.0889 0.0251 0.4444 8.9 4ob8-a1-m1-cA_4ob8-a1-m2-cA
21 4ob8-a1-m1-cA 319 18 0.0889 0.0251 0.4444 8.9 4ob8-a1-m1-cA_4ob8-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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