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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
GVSGSKGQKLFVSVLQRLLSERGLHVKESSAIEFYQFLIKVSPWFPEEGGLNLQDWKRVG
REMKRYAAEHGTDSIPKQAYPIWLQLREILT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4zv5-a1-m1-cB 91 91 1.0000 1.0000 1.0000 2.59e-63 4zv5-a1-m1-cA_4zv5-a1-m1-cB
2 4zv5-a1-m1-cA 91 91 1.0000 1.0000 1.0000 2.59e-63 4zv5-a1-m1-cA_4zv5-a1-m1-cB
3 5hyb-a2-m3-cB 91 91 0.9890 0.9890 0.9890 3.86e-62 5hyb-a2-m1-cA_5hyb-a2-m3-cB
4 5hyb-a2-m1-cA 91 91 0.9890 0.9890 0.9890 3.86e-62 5hyb-a2-m1-cA_5hyb-a2-m3-cB
5 2cg8-a1-m2-cD 246 34 0.1429 0.0528 0.3824 1.0 2cg8-a1-m2-cA_2cg8-a1-m2-cD, 2cg8-a1-m2-cD_2cg8-a1-m2-cC
6 3zpn-a2-m1-cD 106 18 0.1209 0.1038 0.6111 1.3 3zpn-a2-m1-cC_3zpn-a2-m1-cD
7 3zpn-a2-m1-cC 106 18 0.1209 0.1038 0.6111 1.3 3zpn-a2-m1-cC_3zpn-a2-m1-cD
8 2qxl-a1-m1-cA 617 35 0.1209 0.0178 0.3143 4.1 2qxl-a1-m1-cA_2qxl-a1-m1-cB
9 2qxl-a1-m1-cB 625 35 0.1209 0.0176 0.3143 4.1 2qxl-a1-m1-cA_2qxl-a1-m1-cB
10 1js3-a1-m1-cB 464 31 0.1209 0.0237 0.3548 4.9 1js3-a1-m1-cA_1js3-a1-m1-cB
11 1js3-a1-m1-cA 464 31 0.1209 0.0237 0.3548 4.9 1js3-a1-m1-cA_1js3-a1-m1-cB
12 3gqj-a2-m2-cA 248 52 0.1758 0.0645 0.3077 7.3 3gqj-a2-m1-cA_3gqj-a2-m2-cA
13 3gqj-a2-m1-cA 248 52 0.1758 0.0645 0.3077 7.3 3gqj-a2-m1-cA_3gqj-a2-m2-cA
14 6b8v-a2-m2-cC 164 23 0.1209 0.0671 0.4783 7.4 6b8v-a2-m1-cC_6b8v-a2-m2-cC
15 6b8v-a2-m1-cC 164 23 0.1209 0.0671 0.4783 7.4 6b8v-a2-m1-cC_6b8v-a2-m2-cC
16 5ue7-a2-m2-cB 251 40 0.1429 0.0518 0.3250 7.6 5ue7-a2-m1-cA_5ue7-a2-m2-cB
17 5ue7-a2-m1-cA 251 40 0.1429 0.0518 0.3250 7.6 5ue7-a2-m1-cA_5ue7-a2-m2-cB
18 5ue7-a1-m1-cB 251 40 0.1429 0.0518 0.3250 7.6 5ue7-a1-m1-cA_5ue7-a1-m1-cB
19 5ue7-a1-m1-cA 251 40 0.1429 0.0518 0.3250 7.6 5ue7-a1-m1-cA_5ue7-a1-m1-cB
20 8b5v-a1-m1-cB 243 60 0.2198 0.0823 0.3333 9.6 8b5v-a1-m1-cB_8b5v-a1-m1-cA
21 8b5v-a1-m1-cA 244 60 0.2198 0.0820 0.3333 10.0 8b5v-a1-m1-cB_8b5v-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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