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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GVVAAAEKTKQTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKT
VEGAGSIAAATGFVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8ads-a1-m1-cJ 75 75 1.0000 1.0000 1.0000 9.16e-43 8ads-a1-m1-cI_8ads-a1-m1-cJ
2 8ads-a1-m1-cI 75 75 1.0000 1.0000 1.0000 9.16e-43 8ads-a1-m1-cI_8ads-a1-m1-cJ
3 7v4b-a1-m1-cF 80 77 1.0000 0.9375 0.9740 1.06e-40 7v4b-a1-m1-cC_7v4b-a1-m1-cF, 7v4b-a1-m1-cD_7v4b-a1-m1-cF
4 7v4b-a1-m1-cD 80 77 1.0000 0.9375 0.9740 1.06e-40 7v4b-a1-m1-cD_7v4b-a1-m1-cF
5 7v4b-a1-m1-cC 80 77 1.0000 0.9375 0.9740 1.06e-40 7v4b-a1-m1-cC_7v4b-a1-m1-cF
6 2n0a-a1-m1-cJ 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cH_2n0a-a1-m1-cJ, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
7 2n0a-a1-m1-cI 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
8 2n0a-a1-m1-cH 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cG_2n0a-a1-m1-cH, 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cH_2n0a-a1-m1-cJ
9 2n0a-a1-m1-cG 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cE_2n0a-a1-m1-cG, 2n0a-a1-m1-cF_2n0a-a1-m1-cG, 2n0a-a1-m1-cG_2n0a-a1-m1-cH
10 2n0a-a1-m1-cF 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cF_2n0a-a1-m1-cG
11 2n0a-a1-m1-cE 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cC_2n0a-a1-m1-cE, 2n0a-a1-m1-cD_2n0a-a1-m1-cE, 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cE_2n0a-a1-m1-cG
12 2n0a-a1-m1-cD 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cD_2n0a-a1-m1-cE
13 2n0a-a1-m1-cC 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cB_2n0a-a1-m1-cC, 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cC_2n0a-a1-m1-cE
14 2n0a-a1-m1-cB 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cA_2n0a-a1-m1-cB, 2n0a-a1-m1-cB_2n0a-a1-m1-cC
15 2n0a-a1-m1-cA 140 83 1.0000 0.5357 0.9036 6.84e-40 2n0a-a1-m1-cA_2n0a-a1-m1-cB
16 8adw-a1-m1-cJ 99 83 1.0000 0.7576 0.9036 7.41e-40 8adw-a1-m1-cI_8adw-a1-m1-cJ
17 8adw-a1-m1-cI 99 83 1.0000 0.7576 0.9036 7.41e-40 8adw-a1-m1-cI_8adw-a1-m1-cJ
18 6xyq-a1-m1-cE 81 81 0.9733 0.9012 0.9012 1.55e-38 6xyq-a1-m1-cC_6xyq-a1-m1-cE
19 6xyq-a1-m1-cC 81 81 0.9733 0.9012 0.9012 1.55e-38 6xyq-a1-m1-cC_6xyq-a1-m1-cE
20 8cz3-a1-m1-cN 72 74 0.9467 0.9861 0.9595 8.01e-38 8cz3-a1-m1-cM_8cz3-a1-m1-cN
21 8cz3-a1-m1-cM 72 74 0.9467 0.9861 0.9595 8.01e-38 8cz3-a1-m1-cM_8cz3-a1-m1-cN
22 8cys-a1-m1-cO 72 74 0.9467 0.9861 0.9595 8.01e-38 8cys-a1-m1-cN_8cys-a1-m1-cO
23 8cys-a1-m1-cN 72 74 0.9467 0.9861 0.9595 8.01e-38 8cys-a1-m1-cN_8cys-a1-m1-cO
24 6l1u-a1-m1-cB 99 83 0.9867 0.7475 0.8916 1.02e-36 6l1u-a1-m1-cA_6l1u-a1-m1-cB
25 6l1u-a1-m1-cA 99 83 0.9867 0.7475 0.8916 1.02e-36 6l1u-a1-m1-cA_6l1u-a1-m1-cB
26 8aex-a1-m1-cI 71 75 0.9333 0.9859 0.9333 1.45e-36 8aex-a1-m1-cE_8aex-a1-m1-cI
27 8aex-a1-m1-cE 71 75 0.9333 0.9859 0.9333 1.45e-36 8aex-a1-m1-cE_8aex-a1-m1-cI
28 6xyo-a1-m1-cJ 79 70 0.8800 0.8354 0.9429 3.00e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
29 6xyo-a1-m1-cF 79 70 0.8800 0.8354 0.9429 3.00e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
30 8a9l-a1-m3-cA 70 65 0.8533 0.9143 0.9846 6.84e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
31 8a9l-a1-m1-cA 70 65 0.8533 0.9143 0.9846 6.84e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
32 8fpt-a1-m1-cJ 74 65 0.8533 0.8649 0.9846 7.31e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ, 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
33 8fpt-a1-m1-cH 74 65 0.8533 0.8649 0.9846 7.31e-36 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
34 8fpt-a1-m1-cG 74 65 0.8533 0.8649 0.9846 7.31e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ
35 7wo0-a1-m1-cT 65 62 0.8133 0.9385 0.9839 9.12e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
36 7wo0-a1-m1-cS 65 62 0.8133 0.9385 0.9839 9.12e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
37 6xyq-a1-m1-cF 64 61 0.8133 0.9531 1.0000 1.14e-33 6xyq-a1-m1-cB_6xyq-a1-m1-cF
38 6xyq-a1-m1-cB 64 61 0.8133 0.9531 1.0000 1.14e-33 6xyq-a1-m1-cB_6xyq-a1-m1-cF
39 8h03-a1-m1-cF 61 61 0.8133 1.0000 1.0000 1.18e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
40 8h03-a1-m1-cB 61 61 0.8133 1.0000 1.0000 1.18e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
41 7wnz-a1-m1-cI 65 61 0.8000 0.9231 0.9836 5.05e-33 7wnz-a1-m1-cH_7wnz-a1-m1-cI
42 7wnz-a1-m1-cH 65 61 0.8000 0.9231 0.9836 5.05e-33 7wnz-a1-m1-cH_7wnz-a1-m1-cI
43 6a6b-a1-m1-cL 63 60 0.8000 0.9524 1.0000 5.06e-33 6a6b-a1-m1-cK_6a6b-a1-m1-cL
44 6a6b-a1-m1-cK 63 60 0.8000 0.9524 1.0000 5.06e-33 6a6b-a1-m1-cK_6a6b-a1-m1-cL
45 6a6b-a1-m1-cI 63 60 0.8000 0.9524 1.0000 5.06e-33 6a6b-a1-m1-cC_6a6b-a1-m1-cI
46 6a6b-a1-m1-cC 63 60 0.8000 0.9524 1.0000 5.06e-33 6a6b-a1-m1-cC_6a6b-a1-m1-cI
47 7v4c-a1-m1-cF 62 60 0.8000 0.9677 1.0000 5.15e-33 7v4c-a1-m1-cA_7v4c-a1-m1-cF, 7v4c-a1-m1-cB_7v4c-a1-m1-cF
48 7v4c-a1-m1-cB 62 60 0.8000 0.9677 1.0000 5.15e-33 7v4c-a1-m1-cB_7v4c-a1-m1-cF
49 7v4c-a1-m1-cA 62 60 0.8000 0.9677 1.0000 5.15e-33 7v4c-a1-m1-cA_7v4c-a1-m1-cF
50 8h05-a1-m1-cC 60 60 0.8000 1.0000 1.0000 5.83e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
51 8h05-a1-m1-cA 60 60 0.8000 1.0000 1.0000 5.83e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
52 6osm-a1-m1-cJ 60 60 0.8000 1.0000 1.0000 5.90e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
53 6osm-a1-m1-cI 60 60 0.8000 1.0000 1.0000 5.90e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
54 6cu7-a1-m1-cJ 60 59 0.7867 0.9833 1.0000 1.79e-32 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
55 6cu7-a1-m1-cF 60 59 0.7867 0.9833 1.0000 1.79e-32 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
56 7v4d-a1-m1-cF 58 58 0.7733 1.0000 1.0000 8.44e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
57 7v4d-a1-m1-cC 58 58 0.7733 1.0000 1.0000 8.44e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
58 8ceb-a1-m3-cC 58 57 0.7600 0.9828 1.0000 3.45e-30 8ceb-a1-m3-cA_8ceb-a1-m3-cC
59 8ceb-a1-m3-cA 58 57 0.7600 0.9828 1.0000 3.45e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA, 8ceb-a1-m3-cA_8ceb-a1-m3-cC
60 8ceb-a1-m1-cA 58 57 0.7600 0.9828 1.0000 3.45e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA
61 6l4s-a1-m1-cF 55 52 0.6800 0.9273 0.9808 2.28e-26 6l4s-a1-m1-cD_6l4s-a1-m1-cF, 6l4s-a1-m1-cE_6l4s-a1-m1-cF
62 6l4s-a1-m1-cE 55 52 0.6800 0.9273 0.9808 2.28e-26 6l4s-a1-m1-cE_6l4s-a1-m1-cF
63 6l4s-a1-m1-cD 55 52 0.6800 0.9273 0.9808 2.28e-26 6l4s-a1-m1-cD_6l4s-a1-m1-cF
64 7lc9-a1-m1-cG 51 51 0.6800 1.0000 1.0000 2.67e-26 7lc9-a1-m1-cL_7lc9-a1-m1-cG
65 7lc9-a1-m1-cE 51 51 0.6800 1.0000 1.0000 2.67e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
66 7lc9-a1-m1-cD 51 51 0.6800 1.0000 1.0000 2.67e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
67 7e0f-a1-m1-cF 49 47 0.6133 0.9388 0.9787 3.41e-23 7e0f-a1-m1-cC_7e0f-a1-m1-cF, 7e0f-a1-m1-cE_7e0f-a1-m1-cF
68 7e0f-a1-m1-cE 49 47 0.6133 0.9388 0.9787 3.41e-23 7e0f-a1-m1-cE_7e0f-a1-m1-cF
69 7e0f-a1-m1-cC 49 47 0.6133 0.9388 0.9787 3.41e-23 7e0f-a1-m1-cC_7e0f-a1-m1-cF
70 6cu8-a1-m1-cJ 41 41 0.5467 1.0000 1.0000 2.13e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ, 6cu8-a1-m1-cH_6cu8-a1-m1-cJ, 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
71 6cu8-a1-m1-cI 41 41 0.5467 1.0000 1.0000 2.13e-19 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
72 6cu8-a1-m1-cH 41 41 0.5467 1.0000 1.0000 2.13e-19 6cu8-a1-m1-cH_6cu8-a1-m1-cJ
73 6cu8-a1-m1-cF 41 41 0.5467 1.0000 1.0000 2.13e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ
74 7lc9-a1-m1-cK 38 36 0.4800 0.9474 1.0000 2.72e-16 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
75 7lc9-a1-m1-cJ 38 36 0.4800 0.9474 1.0000 2.72e-16 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
76 7lc9-a1-m1-cL 29 29 0.3867 1.0000 1.0000 6.37e-11 7lc9-a1-m1-cL_7lc9-a1-m1-cG
77 7khv-a3-m1-cF 539 45 0.2000 0.0278 0.3333 5.6 7khv-a3-m1-cF_7khv-a3-m1-cE
78 2x77-a1-m1-cA 181 21 0.1200 0.0497 0.4286 7.9 2x77-a1-m1-cB_2x77-a1-m1-cA
79 2x77-a1-m1-cB 166 22 0.1200 0.0542 0.4091 8.3 2x77-a1-m1-cB_2x77-a1-m1-cA
80 1u2g-a1-m1-cA 378 35 0.2267 0.0450 0.4857 9.5 1u2g-a1-m1-cB_1u2g-a1-m1-cA
81 7r9b-a1-m2-cA 223 50 0.1867 0.0628 0.2800 9.9 7r9b-a1-m1-cA_7r9b-a1-m2-cA
82 7r9b-a1-m1-cA 223 50 0.1867 0.0628 0.2800 9.9 7r9b-a1-m1-cA_7r9b-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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