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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
GVVAAATKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAG
SIAAATGFVKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8aex-a1-m1-cI 71 71 1.0000 1.0000 1.0000 9.31e-40 8aex-a1-m1-cE_8aex-a1-m1-cI
2 8aex-a1-m1-cE 71 71 1.0000 1.0000 1.0000 9.31e-40 8aex-a1-m1-cE_8aex-a1-m1-cI
3 7v4b-a1-m1-cF 80 78 1.0000 0.8875 0.9103 6.00e-37 7v4b-a1-m1-cC_7v4b-a1-m1-cF, 7v4b-a1-m1-cD_7v4b-a1-m1-cF
4 7v4b-a1-m1-cD 80 78 1.0000 0.8875 0.9103 6.00e-37 7v4b-a1-m1-cD_7v4b-a1-m1-cF
5 7v4b-a1-m1-cC 80 78 1.0000 0.8875 0.9103 6.00e-37 7v4b-a1-m1-cC_7v4b-a1-m1-cF
6 2n0a-a1-m1-cJ 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cH_2n0a-a1-m1-cJ, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
7 2n0a-a1-m1-cI 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
8 2n0a-a1-m1-cH 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cG_2n0a-a1-m1-cH, 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cH_2n0a-a1-m1-cJ
9 2n0a-a1-m1-cG 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cE_2n0a-a1-m1-cG, 2n0a-a1-m1-cF_2n0a-a1-m1-cG, 2n0a-a1-m1-cG_2n0a-a1-m1-cH
10 2n0a-a1-m1-cF 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cF_2n0a-a1-m1-cG
11 2n0a-a1-m1-cE 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cC_2n0a-a1-m1-cE, 2n0a-a1-m1-cD_2n0a-a1-m1-cE, 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cE_2n0a-a1-m1-cG
12 2n0a-a1-m1-cD 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cD_2n0a-a1-m1-cE
13 2n0a-a1-m1-cC 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cB_2n0a-a1-m1-cC, 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cC_2n0a-a1-m1-cE
14 2n0a-a1-m1-cB 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cA_2n0a-a1-m1-cB, 2n0a-a1-m1-cB_2n0a-a1-m1-cC
15 2n0a-a1-m1-cA 140 68 0.9296 0.4714 0.9706 1.20e-36 2n0a-a1-m1-cA_2n0a-a1-m1-cB
16 8fpt-a1-m1-cJ 74 68 0.9296 0.8919 0.9706 1.21e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ, 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
17 8fpt-a1-m1-cH 74 68 0.9296 0.8919 0.9706 1.21e-36 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
18 8fpt-a1-m1-cG 74 68 0.9296 0.8919 0.9706 1.21e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ
19 8ads-a1-m1-cJ 75 75 0.9859 0.9333 0.9333 1.37e-36 8ads-a1-m1-cI_8ads-a1-m1-cJ
20 8ads-a1-m1-cI 75 75 0.9859 0.9333 0.9333 1.37e-36 8ads-a1-m1-cI_8ads-a1-m1-cJ
21 8adw-a1-m1-cJ 99 68 0.9296 0.6667 0.9706 1.40e-36 8adw-a1-m1-cI_8adw-a1-m1-cJ
22 8adw-a1-m1-cI 99 68 0.9296 0.6667 0.9706 1.40e-36 8adw-a1-m1-cI_8adw-a1-m1-cJ
23 8cz3-a1-m1-cN 72 72 0.9718 0.9583 0.9583 1.48e-36 8cz3-a1-m1-cM_8cz3-a1-m1-cN
24 8cz3-a1-m1-cM 72 72 0.9718 0.9583 0.9583 1.48e-36 8cz3-a1-m1-cM_8cz3-a1-m1-cN
25 8cys-a1-m1-cO 72 72 0.9718 0.9583 0.9583 1.48e-36 8cys-a1-m1-cN_8cys-a1-m1-cO
26 8cys-a1-m1-cN 72 72 0.9718 0.9583 0.9583 1.48e-36 8cys-a1-m1-cN_8cys-a1-m1-cO
27 6xyo-a1-m1-cJ 79 68 0.9296 0.8354 0.9706 1.55e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
28 6xyo-a1-m1-cF 79 68 0.9296 0.8354 0.9706 1.55e-36 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
29 8a9l-a1-m3-cA 70 65 0.9155 0.9286 1.0000 1.89e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
30 8a9l-a1-m1-cA 70 65 0.9155 0.9286 1.0000 1.89e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
31 6xyq-a1-m1-cE 81 65 0.8873 0.7778 0.9692 1.59e-34 6xyq-a1-m1-cC_6xyq-a1-m1-cE
32 6xyq-a1-m1-cC 81 65 0.8873 0.7778 0.9692 1.59e-34 6xyq-a1-m1-cC_6xyq-a1-m1-cE
33 7wo0-a1-m1-cT 65 63 0.8732 0.9538 0.9841 1.70e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
34 7wo0-a1-m1-cS 65 63 0.8732 0.9538 0.9841 1.70e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
35 6xyq-a1-m1-cF 64 62 0.8732 0.9688 1.0000 2.15e-34 6xyq-a1-m1-cB_6xyq-a1-m1-cF
36 6xyq-a1-m1-cB 64 62 0.8732 0.9688 1.0000 2.15e-34 6xyq-a1-m1-cB_6xyq-a1-m1-cF
37 6a6b-a1-m1-cL 63 61 0.8592 0.9683 1.0000 8.64e-34 6a6b-a1-m1-cK_6a6b-a1-m1-cL
38 6a6b-a1-m1-cK 63 61 0.8592 0.9683 1.0000 8.64e-34 6a6b-a1-m1-cK_6a6b-a1-m1-cL
39 6a6b-a1-m1-cI 63 61 0.8592 0.9683 1.0000 8.64e-34 6a6b-a1-m1-cC_6a6b-a1-m1-cI
40 6a6b-a1-m1-cC 63 61 0.8592 0.9683 1.0000 8.64e-34 6a6b-a1-m1-cC_6a6b-a1-m1-cI
41 7v4c-a1-m1-cF 62 61 0.8592 0.9839 1.0000 8.70e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF, 7v4c-a1-m1-cB_7v4c-a1-m1-cF
42 7v4c-a1-m1-cB 62 61 0.8592 0.9839 1.0000 8.70e-34 7v4c-a1-m1-cB_7v4c-a1-m1-cF
43 7v4c-a1-m1-cA 62 61 0.8592 0.9839 1.0000 8.70e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF
44 7wnz-a1-m1-cI 65 62 0.8592 0.9385 0.9839 1.01e-33 7wnz-a1-m1-cH_7wnz-a1-m1-cI
45 7wnz-a1-m1-cH 65 62 0.8592 0.9385 0.9839 1.01e-33 7wnz-a1-m1-cH_7wnz-a1-m1-cI
46 8h03-a1-m1-cF 61 61 0.8592 1.0000 1.0000 1.22e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
47 8h03-a1-m1-cB 61 61 0.8592 1.0000 1.0000 1.22e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
48 6l1u-a1-m1-cB 99 68 0.9155 0.6566 0.9559 1.91e-33 6l1u-a1-m1-cA_6l1u-a1-m1-cB
49 6l1u-a1-m1-cA 99 68 0.9155 0.6566 0.9559 1.91e-33 6l1u-a1-m1-cA_6l1u-a1-m1-cB
50 6cu7-a1-m1-cJ 60 60 0.8451 1.0000 1.0000 3.15e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
51 6cu7-a1-m1-cF 60 60 0.8451 1.0000 1.0000 3.15e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
52 6osm-a1-m1-cJ 60 60 0.8451 1.0000 1.0000 4.84e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
53 6osm-a1-m1-cI 60 60 0.8451 1.0000 1.0000 4.84e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
54 8h05-a1-m1-cC 60 60 0.8451 1.0000 1.0000 5.28e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
55 8h05-a1-m1-cA 60 60 0.8451 1.0000 1.0000 5.28e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
56 7v4d-a1-m1-cF 58 58 0.8169 1.0000 1.0000 8.26e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
57 7v4d-a1-m1-cC 58 58 0.8169 1.0000 1.0000 8.26e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
58 8ceb-a1-m3-cC 58 58 0.8169 1.0000 1.0000 5.46e-31 8ceb-a1-m3-cA_8ceb-a1-m3-cC
59 8ceb-a1-m3-cA 58 58 0.8169 1.0000 1.0000 5.46e-31 8ceb-a1-m1-cA_8ceb-a1-m3-cA, 8ceb-a1-m3-cA_8ceb-a1-m3-cC
60 8ceb-a1-m1-cA 58 58 0.8169 1.0000 1.0000 5.46e-31 8ceb-a1-m1-cA_8ceb-a1-m3-cA
61 6l4s-a1-m1-cF 55 53 0.7324 0.9455 0.9811 4.75e-27 6l4s-a1-m1-cD_6l4s-a1-m1-cF, 6l4s-a1-m1-cE_6l4s-a1-m1-cF
62 6l4s-a1-m1-cE 55 53 0.7324 0.9455 0.9811 4.75e-27 6l4s-a1-m1-cE_6l4s-a1-m1-cF
63 6l4s-a1-m1-cD 55 53 0.7324 0.9455 0.9811 4.75e-27 6l4s-a1-m1-cD_6l4s-a1-m1-cF
64 7lc9-a1-m1-cG 51 51 0.7183 1.0000 1.0000 2.27e-26 7lc9-a1-m1-cL_7lc9-a1-m1-cG
65 7lc9-a1-m1-cE 51 51 0.7183 1.0000 1.0000 2.27e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
66 7lc9-a1-m1-cD 51 51 0.7183 1.0000 1.0000 2.27e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
67 7e0f-a1-m1-cF 49 48 0.6620 0.9592 0.9792 5.30e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF, 7e0f-a1-m1-cE_7e0f-a1-m1-cF
68 7e0f-a1-m1-cE 49 48 0.6620 0.9592 0.9792 5.30e-24 7e0f-a1-m1-cE_7e0f-a1-m1-cF
69 7e0f-a1-m1-cC 49 48 0.6620 0.9592 0.9792 5.30e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF
70 6cu8-a1-m1-cJ 41 41 0.5775 1.0000 1.0000 1.88e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ, 6cu8-a1-m1-cH_6cu8-a1-m1-cJ, 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
71 6cu8-a1-m1-cI 41 41 0.5775 1.0000 1.0000 1.88e-19 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
72 6cu8-a1-m1-cH 41 41 0.5775 1.0000 1.0000 1.88e-19 6cu8-a1-m1-cH_6cu8-a1-m1-cJ
73 6cu8-a1-m1-cF 41 41 0.5775 1.0000 1.0000 1.88e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ
74 7lc9-a1-m1-cK 38 37 0.5211 0.9737 1.0000 4.39e-17 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
75 7lc9-a1-m1-cJ 38 37 0.5211 0.9737 1.0000 4.39e-17 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
76 7lc9-a1-m1-cL 29 29 0.4085 1.0000 1.0000 6.69e-11 7lc9-a1-m1-cL_7lc9-a1-m1-cG
77 1u2g-a1-m1-cA 378 41 0.2817 0.0529 0.4878 2.5 1u2g-a1-m1-cB_1u2g-a1-m1-cA
78 2x77-a1-m1-cA 181 21 0.1268 0.0497 0.4286 6.9 2x77-a1-m1-cB_2x77-a1-m1-cA
79 2x77-a1-m1-cB 166 22 0.1268 0.0542 0.4091 7.1 2x77-a1-m1-cB_2x77-a1-m1-cA
80 7r9b-a1-m2-cA 223 50 0.1972 0.0628 0.2800 7.3 7r9b-a1-m1-cA_7r9b-a1-m2-cA
81 7r9b-a1-m1-cA 223 50 0.1972 0.0628 0.2800 7.3 7r9b-a1-m1-cA_7r9b-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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