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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
GVWSPDIEQSFQEALSIYPGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4z8e-a4-m2-cA 59 55 1.0000 0.9322 1.0000 2.56e-36 4z8e-a4-m2-cC_4z8e-a4-m2-cA
2 4z8e-a4-m1-cB 58 55 1.0000 0.9483 1.0000 2.84e-36 4z8e-a4-m2-cC_4z8e-a4-m1-cB
3 4z8e-a4-m2-cC 55 55 1.0000 1.0000 1.0000 3.25e-36 4z8e-a4-m2-cC_4z8e-a4-m1-cB, 4z8e-a4-m2-cC_4z8e-a4-m2-cA
4 5nnx-a1-m3-cA 74 67 0.9818 0.7297 0.8060 3.89e-32 5nnx-a1-m2-cA_5nnx-a1-m3-cA
5 5nnx-a1-m2-cA 74 67 0.9818 0.7297 0.8060 3.89e-32 5nnx-a1-m2-cA_5nnx-a1-m3-cA
6 7uoi-a1-m2-cA 383 31 0.2545 0.0366 0.4516 1.9 7uoi-a1-m1-cA_7uoi-a1-m2-cA
7 7uoi-a1-m1-cA 383 31 0.2545 0.0366 0.4516 1.9 7uoi-a1-m1-cA_7uoi-a1-m2-cA
8 6om8-a1-m1-cC 463 48 0.3091 0.0367 0.3542 2.0 6om8-a1-m1-cC_6om8-a1-m1-cD
9 6om8-a1-m1-cB 463 48 0.3091 0.0367 0.3542 2.0 6om8-a1-m1-cB_6om8-a1-m1-cD
10 6om8-a1-m1-cD 468 48 0.3091 0.0363 0.3542 2.0 6om8-a1-m1-cB_6om8-a1-m1-cD, 6om8-a1-m1-cC_6om8-a1-m1-cD
11 5ic7-a2-m2-cA 340 34 0.2364 0.0382 0.3824 5.4 5ic7-a2-m1-cA_5ic7-a2-m2-cA
12 5ic7-a2-m1-cA 340 34 0.2364 0.0382 0.3824 5.4 5ic7-a2-m1-cA_5ic7-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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