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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAI
ASLNGYRLGDKILQVSFKT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gc5-a1-m1-cA 79 79 1.0000 1.0000 1.0000 2.79e-55 6gc5-a1-m1-cB_6gc5-a1-m1-cA
2 6gd1-a1-m1-cB 187 79 1.0000 0.4225 1.0000 1.64e-54 6gd1-a1-m1-cB_6gd1-a1-m1-cA
3 6gd1-a1-m1-cA 190 79 1.0000 0.4158 1.0000 1.66e-54 6gd1-a1-m1-cB_6gd1-a1-m1-cA
4 6gc5-a1-m1-cB 76 79 0.9494 0.9868 0.9494 7.65e-50 6gc5-a1-m1-cB_6gc5-a1-m1-cA
5 6r5k-a1-m1-cD 390 76 0.3797 0.0769 0.3947 3.18e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH
6 6r5k-a1-m1-cD 390 73 0.3671 0.0744 0.3973 3.25e-07 6r5k-a1-m1-cD_6r5k-a1-m1-cH
7 6r5k-a1-m1-cD 390 61 0.2278 0.0462 0.2951 9.17e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH
8 6r5k-a1-m1-cD 390 72 0.2532 0.0513 0.2778 2.59e-05 6r5k-a1-m1-cD_6r5k-a1-m1-cH
9 6r5k-a1-m1-cH 394 76 0.3797 0.0761 0.3947 3.18e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
10 6r5k-a1-m1-cH 394 73 0.3671 0.0736 0.3973 3.25e-07 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
11 6r5k-a1-m1-cH 394 61 0.2278 0.0457 0.2951 9.18e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
12 6r5k-a1-m1-cH 394 72 0.2532 0.0508 0.2778 2.59e-05 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
13 3bs9-a3-m1-cB 79 76 0.2911 0.2911 0.3026 2.45e-08 3bs9-a3-m1-cA_3bs9-a3-m1-cB
14 3bs9-a3-m1-cA 79 76 0.2911 0.2911 0.3026 2.45e-08 3bs9-a3-m1-cA_3bs9-a3-m1-cB
15 5t9p-a6-m1-cD 91 73 0.2911 0.2527 0.3151 1.49e-07 5t9p-a6-m1-cD_5t9p-a6-m1-cC
16 5t9p-a6-m1-cC 106 73 0.2911 0.2170 0.3151 2.22e-07 5t9p-a6-m1-cD_5t9p-a6-m1-cC
17 5kw6-a1-m1-cB 198 72 0.2658 0.1061 0.2917 3.15e-07 5kw6-a1-m1-cB_5kw6-a1-m1-cA
18 5kw6-a1-m1-cB 198 69 0.3038 0.1212 0.3478 2.46e-06 5kw6-a1-m1-cB_5kw6-a1-m1-cA
19 5kw6-a1-m1-cA 201 72 0.2658 0.1045 0.2917 3.25e-07 5kw6-a1-m1-cB_5kw6-a1-m1-cA
20 5kw6-a1-m1-cA 201 69 0.3038 0.1194 0.3478 2.73e-06 5kw6-a1-m1-cB_5kw6-a1-m1-cA
21 6r5k-a1-m1-cF 165 65 0.3544 0.1697 0.4308 4.46e-07 6r5k-a1-m1-cF_6r5k-a1-m1-cH
22 6r5k-a1-m1-cF 165 62 0.2278 0.1091 0.2903 1.63e-06 6r5k-a1-m1-cF_6r5k-a1-m1-cH
23 3md1-a4-m5-cB 79 74 0.2532 0.2532 0.2703 6.61e-06 3md1-a4-m4-cB_3md1-a4-m5-cB
24 3md1-a4-m4-cB 79 74 0.2532 0.2532 0.2703 6.61e-06 3md1-a4-m4-cB_3md1-a4-m5-cB
25 5iqq-a1-m1-cD 81 76 0.2785 0.2716 0.2895 1.08e-05 5iqq-a1-m1-cD_5iqq-a1-m1-cC
26 5iqq-a1-m1-cC 83 76 0.2785 0.2651 0.2895 1.24e-05 5iqq-a1-m1-cD_5iqq-a1-m1-cC
27 6dcl-a1-m1-cB 171 57 0.2658 0.1228 0.3684 3.66e-05 6dcl-a1-m1-cB_6dcl-a1-m1-cA
28 6dcl-a1-m1-cA 182 57 0.2658 0.1154 0.3684 3.76e-05 6dcl-a1-m1-cB_6dcl-a1-m1-cA
29 6dcl-a1-m1-cA 182 51 0.1772 0.0769 0.2745 0.003 6dcl-a1-m1-cB_6dcl-a1-m1-cA
30 3md3-a2-m2-cA 165 74 0.2532 0.1212 0.2703 4.39e-05 3md3-a2-m1-cA_3md3-a2-m2-cA
31 3md3-a2-m2-cA 165 75 0.2658 0.1273 0.2800 6.41e-05 3md3-a2-m1-cA_3md3-a2-m2-cA
32 3md3-a2-m1-cA 165 74 0.2532 0.1212 0.2703 4.39e-05 3md3-a2-m1-cA_3md3-a2-m2-cA
33 3md3-a2-m1-cA 165 75 0.2658 0.1273 0.2800 6.41e-05 3md3-a2-m1-cA_3md3-a2-m2-cA
34 7wm3-a2-m1-cD 179 51 0.1899 0.0838 0.2941 6.38e-05 7wm3-a2-m1-cB_7wm3-a2-m1-cD
35 7wm3-a2-m1-cD 179 59 0.2405 0.1061 0.3220 8.79e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
36 7wm3-a2-m1-cB 179 51 0.1899 0.0838 0.2941 6.38e-05 7wm3-a2-m1-cB_7wm3-a2-m1-cD
37 7wm3-a2-m1-cB 179 59 0.2405 0.1061 0.3220 8.79e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
38 5ifn-a1-m1-cB 252 76 0.2911 0.0913 0.3026 3.95e-04 5ifn-a1-m1-cB_5ifn-a1-m1-cA
39 5ifn-a1-m1-cA 257 76 0.2911 0.0895 0.3026 3.96e-04 5ifn-a1-m1-cB_5ifn-a1-m1-cA
40 3val-a1-m1-cI 172 73 0.2785 0.1279 0.3014 4.65e-04 3val-a1-m1-cI_3val-a1-m1-cA
41 2g4b-a1-m2-cA 172 73 0.2785 0.1279 0.3014 4.65e-04 2g4b-a1-m1-cA_2g4b-a1-m2-cA
42 2g4b-a1-m1-cA 172 73 0.2785 0.1279 0.3014 4.65e-04 2g4b-a1-m1-cA_2g4b-a1-m2-cA
43 3val-a1-m1-cA 174 73 0.2785 0.1264 0.3014 4.80e-04 3val-a1-m1-cI_3val-a1-m1-cA
44 3vai-a1-m1-cB 174 73 0.2785 0.1264 0.3014 4.80e-04 3vai-a1-m1-cA_3vai-a1-m1-cB
45 3vai-a1-m1-cA 174 73 0.2785 0.1264 0.3014 4.80e-04 3vai-a1-m1-cA_3vai-a1-m1-cB
46 6dbp-a1-m1-cB 82 49 0.2152 0.2073 0.3469 0.002 6dbp-a1-m1-cB_6dbp-a1-m1-cA
47 6dbp-a1-m1-cA 84 49 0.2152 0.2024 0.3469 0.002 6dbp-a1-m1-cB_6dbp-a1-m1-cA
48 7sp0-a1-m1-cB 244 76 0.2911 0.0943 0.3026 0.002 7sp0-a1-m1-cB_7sp0-a1-m1-cA
49 7sp0-a1-m1-cA 253 76 0.2911 0.0909 0.3026 0.002 7sp0-a1-m1-cB_7sp0-a1-m1-cA
50 5ifm-a1-m1-cA 254 74 0.2785 0.0866 0.2973 0.014 5ifm-a1-m1-cA_5ifm-a1-m1-cB
51 5ifm-a1-m1-cB 259 74 0.2785 0.0849 0.2973 0.014 5ifm-a1-m1-cA_5ifm-a1-m1-cB
52 6es4-a1-m1-cB 204 68 0.2405 0.0931 0.2794 0.056 6es4-a1-m1-cB_6es4-a1-m1-cA
53 6es4-a1-m1-cA 206 68 0.2405 0.0922 0.2794 0.056 6es4-a1-m1-cB_6es4-a1-m1-cA
54 6ff7-a1-m1-cz 101 74 0.2152 0.1683 0.2297 0.16 6ff7-a1-m1-cN_6ff7-a1-m1-cz
55 6ff7-a1-m1-cN 101 74 0.2152 0.1683 0.2297 0.16 6ff7-a1-m1-cN_6ff7-a1-m1-cz
56 3nnc-a2-m4-cA 175 67 0.2405 0.1086 0.2836 0.17 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
57 3nnc-a2-m4-cA 175 61 0.2025 0.0914 0.2623 1.4 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
58 3nnc-a2-m3-cA 175 67 0.2405 0.1086 0.2836 0.17 3nnc-a2-m3-cA_3nnc-a2-m4-cA
59 3nnc-a2-m3-cA 175 61 0.2025 0.0914 0.2623 1.4 3nnc-a2-m3-cA_3nnc-a2-m4-cA
60 3nnc-a2-m2-cA 175 67 0.2405 0.1086 0.2836 0.17 3nnc-a2-m2-cA_3nnc-a2-m4-cA
61 3nnc-a2-m2-cA 175 61 0.2025 0.0914 0.2623 1.4 3nnc-a2-m2-cA_3nnc-a2-m4-cA
62 5det-a1-m1-cA 91 77 0.2785 0.2418 0.2857 0.38 5det-a1-m1-cA_5det-a1-m1-cB
63 5det-a1-m1-cB 94 77 0.2785 0.2340 0.2857 0.43 5det-a1-m1-cA_5det-a1-m1-cB
64 2ghp-a2-m1-cF 235 67 0.2025 0.0681 0.2388 0.54 2ghp-a2-m1-cH_2ghp-a2-m1-cF
65 2ghp-a2-m1-cF 235 74 0.2532 0.0851 0.2703 4.8 2ghp-a2-m1-cH_2ghp-a2-m1-cF
66 2ghp-a2-m1-cH 228 60 0.1899 0.0658 0.2500 0.93 2ghp-a2-m1-cE_2ghp-a2-m1-cH, 2ghp-a2-m1-cG_2ghp-a2-m1-cH, 2ghp-a2-m1-cH_2ghp-a2-m1-cF
67 2ghp-a2-m1-cH 228 74 0.2532 0.0877 0.2703 4.5 2ghp-a2-m1-cE_2ghp-a2-m1-cH, 2ghp-a2-m1-cG_2ghp-a2-m1-cH, 2ghp-a2-m1-cH_2ghp-a2-m1-cF
68 2ghp-a2-m1-cG 228 60 0.1899 0.0658 0.2500 0.93 2ghp-a2-m1-cG_2ghp-a2-m1-cH
69 2ghp-a2-m1-cG 228 74 0.2532 0.0877 0.2703 4.5 2ghp-a2-m1-cG_2ghp-a2-m1-cH
70 2ghp-a2-m1-cE 228 60 0.1899 0.0658 0.2500 0.93 2ghp-a2-m1-cE_2ghp-a2-m1-cH
71 2ghp-a2-m1-cE 228 74 0.2532 0.0877 0.2703 4.5 2ghp-a2-m1-cE_2ghp-a2-m1-cH
72 5ca5-a1-m1-cB 248 78 0.2405 0.0766 0.2436 2.0 5ca5-a1-m1-cA_5ca5-a1-m1-cB
73 5ca5-a1-m1-cA 248 78 0.2405 0.0766 0.2436 2.0 5ca5-a1-m1-cA_5ca5-a1-m1-cB
74 6g6s-a1-m1-cB 91 64 0.2405 0.2088 0.2969 2.3 6g6s-a1-m1-cB_6g6s-a1-m1-cA
75 6g6s-a1-m1-cA 95 64 0.2405 0.2000 0.2969 2.3 6g6s-a1-m1-cB_6g6s-a1-m1-cA
76 6fqr-a1-m1-cA 158 47 0.1646 0.0823 0.2766 5.7 6fqr-a1-m1-cA_6fqr-a1-m1-cB
77 6fqr-a1-m1-cB 160 47 0.1646 0.0813 0.2766 5.9 6fqr-a1-m1-cA_6fqr-a1-m1-cB
78 3egw-a1-m2-cA 1244 50 0.1519 0.0096 0.2400 7.0 3egw-a1-m1-cA_3egw-a1-m2-cA
79 3egw-a1-m1-cA 1244 50 0.1519 0.0096 0.2400 7.0 3egw-a1-m1-cA_3egw-a1-m2-cA
80 3b4d-a1-m2-cA 80 58 0.1772 0.1750 0.2414 7.2 3b4d-a1-m1-cA_3b4d-a1-m2-cA
81 3b4d-a1-m1-cA 80 58 0.1772 0.1750 0.2414 7.2 3b4d-a1-m1-cA_3b4d-a1-m2-cA
82 4yb8-a1-m1-cD 229 52 0.2025 0.0699 0.3077 9.6 4yb8-a1-m1-cB_4yb8-a1-m1-cD
83 4yb8-a1-m1-cB 229 52 0.2025 0.0699 0.3077 9.6 4yb8-a1-m1-cB_4yb8-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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