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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
GWSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNWLGRAKKIGDGGWNQFQFLFFDPNGY
LYAVSKDKLYKAPPPQSDTDNWIARATEIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kih-a1-m1-cC 91 90 1.0000 0.9890 1.0000 6.04e-63 3kih-a1-m1-cA_3kih-a1-m1-cC, 3kih-a1-m1-cC_3kih-a1-m1-cB, 3kih-a1-m1-cE_3kih-a1-m1-cC
2 3kih-a1-m1-cE 90 90 1.0000 1.0000 1.0000 8.42e-63 3kih-a1-m1-cE_3kih-a1-m1-cB, 3kih-a1-m1-cE_3kih-a1-m1-cC, 3kih-a1-m1-cE_3kih-a1-m1-cD
3 3kih-a1-m1-cA 90 90 1.0000 1.0000 1.0000 8.42e-63 3kih-a1-m1-cA_3kih-a1-m1-cC
4 3kih-a1-m1-cB 95 92 1.0000 0.9474 0.9783 8.96e-61 3kih-a1-m1-cC_3kih-a1-m1-cB, 3kih-a1-m1-cE_3kih-a1-m1-cB
5 3kih-a1-m1-cD 91 91 0.9889 0.9780 0.9780 4.39e-60 3kih-a1-m1-cE_3kih-a1-m1-cD
6 3kih-a1-m1-cD 91 45 0.2778 0.2747 0.5556 2.34e-12 3kih-a1-m1-cE_3kih-a1-m1-cD
7 3kif-a3-m1-cI 94 58 0.5778 0.5532 0.8966 7.54e-34 3kif-a3-m1-cH_3kif-a3-m1-cI
8 3kif-a3-m1-cI 94 79 0.5222 0.5000 0.5949 3.35e-28 3kif-a3-m1-cH_3kif-a3-m1-cI
9 3kif-a3-m1-cI 94 13 0.1000 0.0957 0.6923 6.1 3kif-a3-m1-cH_3kif-a3-m1-cI
10 3kif-a3-m1-cF 92 58 0.5778 0.5652 0.8966 8.02e-34 3kif-a3-m1-cG_3kif-a3-m1-cF, 3kif-a3-m1-cH_3kif-a3-m1-cF
11 3kif-a3-m1-cF 92 77 0.5111 0.5000 0.5974 8.47e-28 3kif-a3-m1-cG_3kif-a3-m1-cF, 3kif-a3-m1-cH_3kif-a3-m1-cF
12 3kif-a1-m1-cA 93 58 0.5778 0.5591 0.8966 8.63e-34 3kif-a1-m1-cG_3kif-a1-m1-cA
13 3kif-a1-m1-cA 93 77 0.5111 0.4946 0.5974 8.53e-28 3kif-a1-m1-cG_3kif-a1-m1-cA
14 3kif-a1-m1-cA 93 13 0.1000 0.0968 0.6923 6.4 3kif-a1-m1-cG_3kif-a1-m1-cA
15 3kif-a3-m1-cJ 93 57 0.5667 0.5484 0.8947 4.42e-33 3kif-a3-m1-cG_3kif-a3-m1-cJ, 3kif-a3-m1-cH_3kif-a3-m1-cJ
16 3kif-a3-m1-cJ 93 80 0.5222 0.5054 0.5875 2.05e-28 3kif-a3-m1-cG_3kif-a3-m1-cJ, 3kif-a3-m1-cH_3kif-a3-m1-cJ
17 3kif-a3-m1-cG 88 56 0.5556 0.5682 0.8929 3.82e-32 3kif-a3-m1-cG_3kif-a3-m1-cF, 3kif-a3-m1-cG_3kif-a3-m1-cJ
18 3kif-a3-m1-cG 88 77 0.5111 0.5227 0.5974 9.43e-28 3kif-a3-m1-cG_3kif-a3-m1-cF, 3kif-a3-m1-cG_3kif-a3-m1-cJ
19 3kif-a1-m1-cG 88 56 0.5556 0.5682 0.8929 3.82e-32 3kif-a1-m1-cG_3kif-a1-m1-cA
20 3kif-a1-m1-cG 88 77 0.5111 0.5227 0.5974 9.43e-28 3kif-a1-m1-cG_3kif-a1-m1-cA
21 3kif-a3-m1-cH 85 51 0.5111 0.5412 0.9020 2.36e-28 3kif-a3-m1-cH_3kif-a3-m1-cF, 3kif-a3-m1-cH_3kif-a3-m1-cI, 3kif-a3-m1-cH_3kif-a3-m1-cJ
22 3kif-a3-m1-cH 85 79 0.5222 0.5529 0.5949 2.66e-28 3kif-a3-m1-cH_3kif-a3-m1-cF, 3kif-a3-m1-cH_3kif-a3-m1-cI, 3kif-a3-m1-cH_3kif-a3-m1-cJ
23 3rm5-a1-m1-cB 519 69 0.2222 0.0385 0.2899 1.1 3rm5-a1-m1-cB_3rm5-a1-m1-cA
24 3rm5-a1-m1-cA 521 69 0.2222 0.0384 0.2899 1.1 3rm5-a1-m1-cB_3rm5-a1-m1-cA
25 4rx1-a3-m1-cB 198 36 0.1333 0.0606 0.3333 6.1 4rx1-a3-m1-cB_4rx1-a3-m1-cA
26 4rx1-a3-m1-cA 213 36 0.1333 0.0563 0.3333 7.0 4rx1-a3-m1-cB_4rx1-a3-m1-cA
27 7t6f-a1-m1-cB 1045 41 0.1333 0.0115 0.2927 8.3 7t6f-a1-m1-cA_7t6f-a1-m1-cB
28 7t6f-a1-m1-cA 1045 41 0.1333 0.0115 0.2927 8.3 7t6f-a1-m1-cA_7t6f-a1-m1-cB
29 6gno-a1-m2-cB 114 47 0.1556 0.1228 0.2979 8.4 6gno-a1-m1-cA_6gno-a1-m2-cB, 6gno-a1-m2-cA_6gno-a1-m2-cB
30 6gno-a1-m2-cA 114 47 0.1556 0.1228 0.2979 8.4 6gno-a1-m1-cA_6gno-a1-m2-cA, 6gno-a1-m2-cA_6gno-a1-m2-cB
31 6gno-a1-m1-cA 114 47 0.1556 0.1228 0.2979 8.4 6gno-a1-m1-cA_6gno-a1-m2-cA, 6gno-a1-m1-cA_6gno-a1-m2-cB
32 5its-a2-m1-cC 188 19 0.1000 0.0479 0.4737 9.9 5its-a2-m1-cC_5its-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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